Genome-Wide Identification of the LAC Gene Family and Its Expression Analysis Under Stress in Brassica napus
Lignin is an important biological polymer in plants that is necessary for plant secondary cell wall ontogenesis. The laccase ( ) gene family catalyzes lignification and has been suggested to play a vital role in the plant kingdom. In this study, we identified 45 genes from the genome ( ), 25 genes f...
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Veröffentlicht in: | Molecules (Basel, Switzerland) Switzerland), 2019-05, Vol.24 (10), p.1985 |
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Hauptverfasser: | , , , , , , , , , , |
Format: | Artikel |
Sprache: | eng |
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Zusammenfassung: | Lignin is an important biological polymer in plants that is necessary for plant secondary cell wall ontogenesis. The laccase (
) gene family catalyzes lignification and has been suggested to play a vital role in the plant kingdom. In this study, we identified 45
genes from the
genome (
), 25
genes from the
genome (
) and 8
genes from the
genome (
). These
genes could be divided into five groups in a cladogram and members in same group had similar structures and conserved motifs. All
contained hormone- and stress- related elements determined by cis-element analysis. The expression of
was relatively higher in the root, seed coat and stem than in other tissues. Furthermore,
and its predicted downstream genes showed earlier expression in the silique pericarps of short silique lines than long silique lines. Three miRNAs (miR397a, miR397b and miR6034) target 11
were also predicted. The expression changes of
under series of stresses were further investigated by RNA sequencing (RNA-seq) and quantitative real-time polymerase chain reaction (qRT-PCR). The study will give a deeper understanding of the
gene family evolution and functions in |
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ISSN: | 1420-3049 1420-3049 |
DOI: | 10.3390/molecules24101985 |