Bacterial community diversity of the deep-sea octocoral Paramuricea placomus
Compared to tropical corals, much less is known about deep-sea coral biology and ecology. Although the microbial communities of some deep-sea corals have been described, this is the first study to characterize the bacterial community associated with the deep-sea octocoral, . Samples from five coloni...
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Veröffentlicht in: | PeerJ (San Francisco, CA) CA), 2016-09, Vol.4, p.e2529-e2529, Article e2529 |
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Sprache: | eng |
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Zusammenfassung: | Compared to tropical corals, much less is known about deep-sea coral biology and ecology. Although the microbial communities of some deep-sea corals have been described, this is the first study to characterize the bacterial community associated with the deep-sea octocoral,
. Samples from five colonies of
were collected from Baltimore Canyon (379-382 m depth) in the Atlantic Ocean off the east coast of the United States of America. DNA was extracted from the coral samples and 16S rRNA gene amplicons were pyrosequenced using V4-V5 primers. Three samples sequenced deeply (>4,000 sequences each) and were further analyzed. The dominant microbial phylum was Proteobacteria, but other major phyla included Firmicutes and Planctomycetes. A conserved community of bacterial taxa held in common across the three
colonies was identified, comprising 68-90% of the total bacterial community depending on the coral individual. The bacterial community of
does not appear to include the genus
, which has been found previously to be the dominant bacterial associate in several temperate and tropical gorgonians. Inferred functionality suggests the possibility of nitrogen cycling by the core bacterial community. |
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ISSN: | 2167-8359 2167-8359 |
DOI: | 10.7717/peerj.2529 |