Characterization and phylogenetic analysis of the complete plastid genome of Theobroma bicolor (Malvaceae) from Peru
Bonpl. 1806 is distributed in the Neotropics from southern Mexico to the Peruvian and Brazilian Amazon. High-throughput sequencing of from Peru (KUELAP2926) resulted in the assembly of its complete plastid genome (GenBank accession number OQ557154). The chloroplast genome of is A + T-rich (62.97%),...
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Veröffentlicht in: | Mitochondrial DNA. Part B. Resources 2024-02, Vol.9 (2), p.227-232 |
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Sprache: | eng |
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Zusammenfassung: | Bonpl. 1806 is distributed in the Neotropics from southern Mexico to the Peruvian and Brazilian Amazon. High-throughput sequencing of
from Peru (KUELAP2926) resulted in the assembly of its complete plastid genome (GenBank accession number OQ557154). The chloroplast genome of
is A + T-rich (62.97%), having 160,317 bp in size and containing 130 genes; including a pair of inverted repeat regions (IRs) of 25,462 bp separated by a large single copy region (LSC) of 89,221 bp and a small single copy region (SSC) of 20,172 bp. This plastid genome is similar in length, content, and organization to other members of the genus
. Phylogenetic analyses of
support its sistership to the clade comprising
and
. This study may contribute valuable information to the phylogenetic relationships within the genus
. |
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ISSN: | 2380-2359 2380-2359 |
DOI: | 10.1080/23802359.2024.2310134 |