Understanding m6A changes in chromophobe renal cell carcinoma and predicting patient outcomes survival

N6-methyladenosine (m A) is a prevalent mRNA modification known for its implications in various cancer types, yet its role in chromophobe renal cell carcinoma (chRCC) remains largely unexplored. In this study, we performed m6A-SEAL-seq and RNA-seq analyses on tissues from three chRCC subjects, aimin...

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Veröffentlicht in:BMC cancer 2024-09, Vol.24 (1), p.1187-12, Article 1187
Hauptverfasser: Chen, Zhigang, Yang, Junbo, Zhang, Wei, Qian, Yang, Zhang, Nan, Chen, Zixin, Lu, Min, Ge, Liyuan, Liu, Cheng, Tian, Xiaojun, Jia, Guifang, Ma, Lulin, Li, Baoguo
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Sprache:eng
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Zusammenfassung:N6-methyladenosine (m A) is a prevalent mRNA modification known for its implications in various cancer types, yet its role in chromophobe renal cell carcinoma (chRCC) remains largely unexplored. In this study, we performed m6A-SEAL-seq and RNA-seq analyses on tissues from three chRCC subjects, aiming to uncover m A alterations in chRCC. Our findings revealed reduced expression levels of four m A regulators in chRCC tissues and highlighted differences in m A levels compared to normal tissues. Furthermore, we identified specific genes and cancer-related pathways affected by these differences, including notable candidates like NOTCH1 and FGFR1, implicated in chRCC development. Additionally, we developed a predictive model based on the expression level of m A associated genes, demonstrating promising prognostic capabilities for patient survival prediction. Overall, our study provides valuable insights into the role of m A in chRCC and its potential as a prognostic indicator.
ISSN:1471-2407
1471-2407
DOI:10.1186/s12885-024-12956-6