PLEKHA4/kramer Attenuates Dishevelled Ubiquitination to Modulate Wnt and Planar Cell Polarity Signaling

Wnt signaling pathways direct key physiological decisions in development. Here, we establish a role for a pleckstrin homology domain-containing protein, PLEKHA4, as a modulator of signaling strength in Wnt-receiving cells. PLEKHA4 oligomerizes into clusters at PI(4,5)P2-rich regions of the plasma membrane and recruits the Cullin-3 (CUL3) E3 ubiquitin ligase substrate adaptor Kelch-like protein 12 (KLHL12) to these assemblies. This recruitment decreases CUL3-KLHL12-mediated polyubiquitination of Dishevelled, a central intermediate in canonical and non-canonical Wnt signaling. Knockdown of PLEKHA4 in mammalian cells demonstrates that PLEKHA4 positively regulates canonical and non-canonical Wnt signaling via these effects on the Dishevelled polyubiquitination machinery. In vivo knockout of the Drosophila melanogaster PLEKHA4 homolog, kramer, selectively affects the non-canonical, planar cell polarity (PCP) signaling pathway. We propose that PLEKHA4 tunes the sensitivities of cells toward the stimulation of Wnt or PCP signaling by sequestering a key E3 ligase adaptor controlling Dishevelled polyubiquitination within PI(4,5)P2-rich plasma membrane clusters. [Display omitted] •PLEKHA4 promotes Wnt signaling by inhibiting the degradation of Dishevelled (DVL)•PLEKHA4 binds to PI(4,5)P2 and oligomerizes into plasma membrane clusters•The clusters sequester a Cullin-3 adaptor, KLHL12, preventing DVL ubiquitination•The Drosophila PLEKHA4 homolog, kramer, regulates planar cell polarity signaling Regulation of Wnt signaling is critical to metazoan development. Shami Shah et al. identify a phosphoinositide-binding protein, PLEKHA4/kramer, that enhances Wnt signaling in mammalian cells and the non-canonical pathway, planar cell polarity, in Drosophila. Mechanistically, PLEKHA4 sequesters the Cullin-3 E3 ligase adaptor KLHL12 in plasma membrane clusters, preventing Dishevelled polyubiquitination.