High-pressure polymorphism in pyridine

Single crystals of the high-pressure phases II and III of pyridine have been obtained by crystallization at 1.09 and 1.69 GPa, revealing the crystal structure of phase III for the first time using X-ray diffraction. Phase II crystallizes in 2 2 2 with ' = 1 and phase III in 4 2 2 with ' =...

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Veröffentlicht in:IUCrJ 2020-01, Vol.7 (Pt 1), p.58-70
Hauptverfasser: Giordano, Nico, Beavers, Christine M, Campbell, Branton J, Eigner, Václav, Gregoryanz, Eugene, Marshall, Willliam G, Peña-Álvarez, Miriam, Teat, Simon J, Vennari, Cara E, Parsons, Simon
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Sprache:eng
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Zusammenfassung:Single crystals of the high-pressure phases II and III of pyridine have been obtained by crystallization at 1.09 and 1.69 GPa, revealing the crystal structure of phase III for the first time using X-ray diffraction. Phase II crystallizes in 2 2 2 with ' = 1 and phase III in 4 2 2 with ' = ½. Neutron powder diffraction experiments using pyridine-d establish approximate equations of state of both phases. The space group and unit-cell dimensions of phase III are similar to the structures of other simple compounds with molecular symmetry, and the phase becomes stable at high pressure because it is topologically close-packed, resulting in a lower molar volume than the topologically body-centred cubic phase II. Phases II and III have been observed previously by Raman spectroscopy, but have been mis-identified or inconsistently named. Raman spectra collected on the same samples as used in the X-ray experiments establish the vibrational characteristics of both phases unambiguously. The pyridine molecules interact in both phases through CH⋯π and CH⋯N interactions. The nature of individual contacts is preserved through the phase transition between phases III and II, which occurs on decompression. A combination of rigid-body symmetry mode analysis and density functional theory calculations enables the soft vibrational lattice mode which governs the transformation to be identified.
ISSN:2052-2525
2052-2525
DOI:10.1107/S2052252519015616