NOTE - Genetic variability among cassava accessions based on SSR markers

The aim of this study was to characterize and estimate the genetic similarity among 93 cassava accessions. The DNAamplification was performed with 14 microsatellite primers. The amplification products were separated by a polyacrylamide gelelectrophoresis, showing a polymorphism formation, through wh...

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Veröffentlicht in:Crop breeding and applied biotechnology 2011-01, Vol.11 (3), p.263-269
Hauptverfasser: Márcia de Nazaré Oliveira Ribeiro, Samuel Pereira de Carvalho, João Bosco dos Santos, Rafaela Priscila Antonio
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Sprache:eng
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Zusammenfassung:The aim of this study was to characterize and estimate the genetic similarity among 93 cassava accessions. The DNAamplification was performed with 14 microsatellite primers. The amplification products were separated by a polyacrylamide gelelectrophoresis, showing a polymorphism formation, through which the accessions were discriminated against. The genetic similarityamong accessions of cassava was estimated by the Dice coefficient. Cluster analysis was carried out using the UPGMA method. Thepolymorphic primers amplified a total of 26 alleles with 2-4 alleles per loci. The genetic similarity ranged from 0.16 to 0.96. Theaverage values for observed and expected heterozygosity were 0.18 and 0.46, respectively. Twenty genetic similarity clusters weredetermined, demonstrating diversity among accessions, suggesting the possibility of heterotic hybrid generation.
ISSN:1518-7853
1984-7033