Comprehensive analysis of m7G modification patterns based on potential m7G regulators and tumor microenvironment infiltration characterization in lung adenocarcinoma
Background: The non-negligible role of epigenetic modifications in cancer development and tumor microenvironment (TME) has been demonstrated in recent studies. Nonetheless, the potential regulatory role of N7-methylguanosine (m 7 G) modification in shaping and impacting the TME remains unclear. Meth...
Gespeichert in:
Veröffentlicht in: | Frontiers in genetics 2022-09, Vol.13, p.996950-996950 |
---|---|
Hauptverfasser: | , , , , , , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
Zusammenfassung: | Background:
The non-negligible role of epigenetic modifications in cancer development and tumor microenvironment (TME) has been demonstrated in recent studies. Nonetheless, the potential regulatory role of N7-methylguanosine (m
7
G) modification in shaping and impacting the TME remains unclear.
Methods:
A comprehensive analysis was performed to explore the m
7
G modification patterns based on 24 potential m
7
G regulators in 817 lung adenocarcinoma (LUAD) patients, and the TME landscape in distinct m
7
G modification patterns were evaluated. The m
7
G score was established based on principal component analysis (PCA) to quantify m
7
G modification patterns and evaluate the TME cell infiltrating characteristics of individual tumors. Further, correlation analyses of m7Gscore with response to chemotherapy and immunotherapy were performed.
Results:
We identified three distinct m
7
G modification patterns with the biological pathway enrichment and TME cell infiltrating characteristics corresponded to immune-desert, immune-inflamed and immune-excluded phenotype, respectively. We further demonstrated the m
7
Gscore could predict the TME infiltrating characteristics, tumor mutation burden (TMB), response to immunotherapy and chemotherapy, as well as prognosis of individual tumors. High m
7
Gscore was associated with increased component of immune cell infiltration, low TMB and survival advantage, while low m
7
Gscore was linked to decreased immune cell infiltration and increased TMB. Additionally, patients with lower m
7
Gscore demonstrated significant therapeutic advantages.
Conclusion:
This study demonstrated the regulatory mechanisms of m
7
G modification on TME formation and regulation of lung adenocarcinoma. Identification of individual tumor m
7
G modification patterns will contribute to the understanding of TME characterization and guiding more effective immunotherapy strategies. |
---|---|
ISSN: | 1664-8021 1664-8021 |
DOI: | 10.3389/fgene.2022.996950 |