Comprehensive analysis of m7G modification patterns based on potential m7G regulators and tumor microenvironment infiltration characterization in lung adenocarcinoma

Background: The non-negligible role of epigenetic modifications in cancer development and tumor microenvironment (TME) has been demonstrated in recent studies. Nonetheless, the potential regulatory role of N7-methylguanosine (m 7 G) modification in shaping and impacting the TME remains unclear. Meth...

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Veröffentlicht in:Frontiers in genetics 2022-09, Vol.13, p.996950-996950
Hauptverfasser: Ma, Shouzheng, Zhu, Jun, Wang, Mengmeng, Zhu, Jianfei, Wang, Wenchen, Xiong, Yanlu, Jiang, Runmin, Liu, Lei, Jiang, Tao
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Sprache:eng
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Zusammenfassung:Background: The non-negligible role of epigenetic modifications in cancer development and tumor microenvironment (TME) has been demonstrated in recent studies. Nonetheless, the potential regulatory role of N7-methylguanosine (m 7 G) modification in shaping and impacting the TME remains unclear. Methods: A comprehensive analysis was performed to explore the m 7 G modification patterns based on 24 potential m 7 G regulators in 817 lung adenocarcinoma (LUAD) patients, and the TME landscape in distinct m 7 G modification patterns were evaluated. The m 7 G score was established based on principal component analysis (PCA) to quantify m 7 G modification patterns and evaluate the TME cell infiltrating characteristics of individual tumors. Further, correlation analyses of m7Gscore with response to chemotherapy and immunotherapy were performed. Results: We identified three distinct m 7 G modification patterns with the biological pathway enrichment and TME cell infiltrating characteristics corresponded to immune-desert, immune-inflamed and immune-excluded phenotype, respectively. We further demonstrated the m 7 Gscore could predict the TME infiltrating characteristics, tumor mutation burden (TMB), response to immunotherapy and chemotherapy, as well as prognosis of individual tumors. High m 7 Gscore was associated with increased component of immune cell infiltration, low TMB and survival advantage, while low m 7 Gscore was linked to decreased immune cell infiltration and increased TMB. Additionally, patients with lower m 7 Gscore demonstrated significant therapeutic advantages. Conclusion: This study demonstrated the regulatory mechanisms of m 7 G modification on TME formation and regulation of lung adenocarcinoma. Identification of individual tumor m 7 G modification patterns will contribute to the understanding of TME characterization and guiding more effective immunotherapy strategies.
ISSN:1664-8021
1664-8021
DOI:10.3389/fgene.2022.996950