Additional file 4: of Cross-linking BioThings APIs through JSON-LD to facilitate knowledge exploration

Figure showing an example of data discrepancy for rsid between different sources. Data discrepancy for rsid between different sources, e.g. dbNSFP, dbSNP and mutDB. The default assembly used in dbNSFP is hg38. And the hg19 genomic positions provided by dbNSFP were lifted over from its hg38 positions...

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Hauptverfasser: Jiwen Xin, Afrasiabi, Cyrus, Lelong, Sebastien, Julee Adesara, Tsueng, Ginger, Su, Andrew, Chunlei Wu
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Sprache:eng
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Zusammenfassung:Figure showing an example of data discrepancy for rsid between different sources. Data discrepancy for rsid between different sources, e.g. dbNSFP, dbSNP and mutDB. The default assembly used in dbNSFP is hg38. And the hg19 genomic positions provided by dbNSFP were lifted over from its hg38 positions, which is corresponding to a different rsid (“rs542852754”) in this case from the one dbSNP provides (“rs7182058”). This suggests an error caused in the liftover process. (EPS 139 kb)
DOI:10.6084/m9.figshare.5848998