A population study of the minicircles in : predicting guide RNAs in the absence of empirical RNA editing-7

Copyright information:Taken from "A population study of the minicircles in : predicting guide RNAs in the absence of empirical RNA editing"http://www.biomedcentral.com/1471-2164/8/133BMC Genomics 2007;8():133-133.Published online 24 May 2007PMCID:PMC1892023.irst line depicts the four states: 'upstream', 'gRNA', 'downstream 1' and 'downstream 2', as well as the presence of sub-states for each. The implicit 'START' and 'END' states are not shown. The transition probabilities from the gRNA state are shown, otherwise the transitions are assumed to occur invariably. Depicted below the model is a visual representation of the nucleotide preferences for each state (T-red, A-purple, G-green, C-blue) and the emission probabilities used for each state.