PhyloMatrix: phylogenetic profiling based on SYSTERS protein families

Copyright information:Taken from "The SYSTERS Protein Family Database in 2005"Nucleic Acids Research 2004 ;33(Database Issue):D226-D229.Published online 17 Dec 2004 PMCID:PMC539984.Copyright © 2005 Oxford University Press (i) On the left: PhyloMatrix entry page with several options to access phylogenetic profiles: (a) by browsing, (b) by family selection or (c) by specification of an organism pattern. (ii) On the right: 45 phylogenetic patterns describe 99 protein families comprising ribosomal proteins. For the given example, protein families were pre-selected via the second option (b). The order of organisms in each pattern follows the same order in taxonomic tree of the query page. Selected profiles are sorted according to a hierarchical clustering of all profiles.