Additional file 4 of Phylogenomic assessment of 23 equid alphaherpesvirus 1 isolates obtained from USA-based equids

Additional file 4 of Phylogenomic assessment of 23 equid alphaherpesvirus 1 isolates obtained from USA-based equids

Additional file 4: Table S26. Detailed results of manual bootscan recombination detection performed using an alignment containing all 137 EHV-1 isolates in RDP version 4.100 (33) (window = 1200, step = 500, replicates = 100, Jin and Nei model). Bootstrap support values of 70% or greater were conside...

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Hauptverfasser: Emelogu, Ugochi, Lewin, Andrew C., Balasuriya, Udeni B. R., Liu, Chin-Chi, Wilkes, Rebecca P., Zhang, Jianqiang, Mills, Erinn P., Carter, Renee T.
Format: Dataset
Sprache:eng
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FOS: Biological sciences
Genetics
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Zusammenfassung:Additional file 4: Table S26. Detailed results of manual bootscan recombination detection performed using an alignment containing all 137 EHV-1 isolates in RDP version 4.100 (33) (window = 1200, step = 500, replicates = 100, Jin and Nei model). Bootstrap support values of 70% or greater were considered reliable evidence of possible recombination. Evidence of recombination events was detected in most (20/23) of the newly sequenced EHV-1 isolates by manual bootscan.
DOI:10.6084/m9.figshare.26647059