Additional file 10 of A comprehensive analysis of the genetic diversity and environmental adaptability in worldwide Merino and Merino-derived sheep breeds

Additional file 10: Figure S6. Optional number of migration events in the complete dataset calculated by using the “plot_optM” function in the R package OptM. (a) The mean and standard deviation (SD) for the composite likelihood L(m) (left axis, black circles) and proportion of variance explained (r...

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Hauptverfasser: Ceccobelli, Simone, Landi, Vincenzo, Senczuk, Gabriele, Mastrangelo, Salvatore, Sardina, Maria Teresa, Ben-Jemaa, Slim, Persichilli, Christian, Karsli, Taki, Bâlteanu, Valentin-Adrian, Raschia, María Agustina, Poli, Mario Andrés, Ciappesoni, Gabriel, Muchadeyi, Farai Catherine, Dzomba, Edgar Farai, Kunene, Nokuthula Winfred, Lühken, Gesine, Deniskova, Tatiana Evgenievna, Dotsev, Arsen Vladimirovich, Zinovieva, Natalia Anatolievna, Zsolnai, Attila, Anton, István, Kusza, Szilvia, Carolino, Nuno, Santos-Silva, Fátima, Kawęcka, Aldona, Świątek, Marcin, Niżnikowski, Roman, Špehar, Marija, Anaya, Gabriel, Granero, Antonio, Perloiro, Tiago, Cardoso, Pedro, Grande, Silverio, de los Santos, Beatriz López, Danchin-Burge, Coralie, Pasquini, Marina, Martínez Martínez, Amparo, Delgado Bermejo, Juan Vicente, Lasagna, Emiliano, Ciani, Elena, Sarti, Francesca Maria, Pilla, Fabio
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Zusammenfassung:Additional file 10: Figure S6. Optional number of migration events in the complete dataset calculated by using the “plot_optM” function in the R package OptM. (a) The mean and standard deviation (SD) for the composite likelihood L(m) (left axis, black circles) and proportion of variance explained (right axis, red circles). The 99.8% threshold is that recommended by Pickrell and Pritchard [49], but not visible here because the threshold is still not met at m = 10 edges. (b) The second-order rate of change (Δm) across values of m. The black arrow indicates the peak in Δm at m = 4 edges.
DOI:10.6084/m9.figshare.26580014