Raw and processed (filtered and annotated) scRNAseq data

Single cell RNA-seq data generated and reported as part of the manuscript entitled "Human CD34+-derived plasmacytoid dendritic cells as surrogates for primary pDCs and potential cancer immunotherapy" by Fiore et al.Raw and processed (filtered and annotated) data are provided, which can be...

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Hauptverfasser: Fiore, Giovanna, Weckwarth, Wolfgang, Paetzold, Kerstin, Albertí Servera, Llucia, Nassiri, Sina, Schmeing, Stephan, Dettling, Steffen, Soni, Bhavesh, Majety, Meher, Krug, Anne B., Hoves, Sabine, Wolf, Monika Julia
Format: Dataset
Sprache:eng
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Zusammenfassung:Single cell RNA-seq data generated and reported as part of the manuscript entitled "Human CD34+-derived plasmacytoid dendritic cells as surrogates for primary pDCs and potential cancer immunotherapy" by Fiore et al.Raw and processed (filtered and annotated) data are provided, which can be directly ingested to reproduce the findings of the paper or for ab initio data reuse:1- raw.h5ad provides concatenated raw/unfiltered table of counts as obtained from Cell Ranger, along with relevant metadata in the standard H5AD format.2- processed.h5ad provides raw and normalized counts for those cells that passed QC and were annotated as pDC, along with relevant metadata in the standard H5AD format.For instance, to load data in R, try:library(zellkonverter)raw
DOI:10.6084/m9.figshare.25561950