Consensus sequence

Copyright information:Taken from "Identification of regions in multiple sequence alignments thermodynamically suitable for targeting by consensus oligonucleotides: application to HIV genome"BMC Bioinformatics 2004;5():44-44.Published online 29 Apr 2004PMCID:PMC419695.Copyright © 2004 Matveeva et al; licensee BioMed Central Ltd. This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose, provided this notice is preserved along with the article's original URL. Last nucleotides in the theoretically optimal target regions are highlighted. The range of fragments that were analyzed was from 23 to 35-mers. The length of optimal region is shown below the highlighted nucleotide. Only numbers for shortest regions in the sets that correspond to each highlighted nucleotide are shown.