Additional file 1 of Genome-wide association mapping reveals new loci associated with light-colored seed coat at harvest and slow darkening in carioca beans

Additional file 1 of Genome-wide association mapping reveals new loci associated with light-colored seed coat at harvest and slow darkening in carioca beans

Additional file 1: Figure S1. (a) Principal component analysis based on the 1, 516 SNPs for the carioca diversity panel (n = 138); (b) Kinship heatmap plot showing the population relationship, estimated according to VanRaden [68]. (c) Linkage disequilibrium (LD) decay determined by the LD measuremen...

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Hauptverfasser: de Almeida, Caléo Panhoca, Santos, Isabella Laporte, de Carvalho Paulino, Jean Fausto, Barbosa, Caio Cesar Ferrari, Pereira, Cássia Cristina Augusto, Carvalho, Cassia Regina Limonta, de Moraes Cunha Gonçalves, Gabriel, Song, Qijian, Carbonell, Sérgio Augusto Morais, Chiorato, Alisson Fernando, Benchimol-Reis, Luciana Lasry
Format: Bild
Sprache:eng
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FOS: Biological sciences
Genetics
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Zusammenfassung:Additional file 1: Figure S1. (a) Principal component analysis based on the 1, 516 SNPs for the carioca diversity panel (n = 138); (b) Kinship heatmap plot showing the population relationship, estimated according to VanRaden [68]. (c) Linkage disequilibrium (LD) decay determined by the LD measurements (r2) against the distance between SNPs (Mb) for the 11 chromosomes (Pv) adjusted according to the model proposed by Hill and Weir [69] controlled for relatedness.
DOI:10.6084/m9.figshare.15026496