Additional file 7 of Comparative Analysis of Genome of Ehrlichia sp. HF, a Model Bacterium to Study Fatal Human Ehrlichiosis
Additional file 7: Figure S2. Gene Structures of Ehrlichia sp. HF Type IV Secretion System. Ehrlichia sp. HF encodes a Type IV secretion system. These virB/D genes are split into three major operons: virB2/4, virB3/4/6virB3/4/6, virB8/9/10/11/D4, and three separate loci: virB7 and duplicated virB8-2...
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| creator | Lin, Mingqun Qingming Xiong Chung, Matthew Daugherty, Sean C. Nagaraj, Sushma Sengamalay, Naomi Ott, Sandra Godinez, Al Tallon, Luke J. Sadzewicz, Lisa Fraser, Claire Hotopp, Julie C. Dunning Rikihisa, Yasuko |
| description | Additional file 7: Figure S2. Gene Structures of Ehrlichia sp. HF Type IV Secretion System. Ehrlichia sp. HF encodes a Type IV secretion system. These virB/D genes are split into three major operons: virB2/4, virB3/4/6virB3/4/6, virB8/9/10/11/D4, and three separate loci: virB7 and duplicated virB8-2 and virB9-2. virB2 genes are duplicated into 5 copies, whereas virB6 into 4 copies. Genes encoding virB1 and virB5 are not present in HF genome. Note: Due to the short protein length and low homology, virB7 was not annotated as an ORF by NCBI automated annotation pipeline. However, by TBLASTN using A. marginale VirB7 protein sequence [121] against the entire HF genome sequence, a putative virB7 gene was identified and manual curated. |
| doi_str_mv | 10.6084/m9.figshare.13534400 |
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These virB/D genes are split into three major operons: virB2/4, virB3/4/6virB3/4/6, virB8/9/10/11/D4, and three separate loci: virB7 and duplicated virB8-2 and virB9-2. virB2 genes are duplicated into 5 copies, whereas virB6 into 4 copies. Genes encoding virB1 and virB5 are not present in HF genome. Note: Due to the short protein length and low homology, virB7 was not annotated as an ORF by NCBI automated annotation pipeline. 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Dunning</creatorcontrib><creatorcontrib>Rikihisa, Yasuko</creatorcontrib><collection>DataCite (Open Access)</collection><collection>DataCite</collection></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext_linktorsrc</fulltext></delivery><addata><au>Lin, Mingqun</au><au>Qingming Xiong</au><au>Chung, Matthew</au><au>Daugherty, Sean C.</au><au>Nagaraj, Sushma</au><au>Sengamalay, Naomi</au><au>Ott, Sandra</au><au>Godinez, Al</au><au>Tallon, Luke J.</au><au>Sadzewicz, Lisa</au><au>Fraser, Claire</au><au>Hotopp, Julie C. Dunning</au><au>Rikihisa, Yasuko</au><format>book</format><genre>unknown</genre><ristype>GEN</ristype><title>Additional file 7 of Comparative Analysis of Genome of Ehrlichia sp. HF, a Model Bacterium to Study Fatal Human Ehrlichiosis</title><date>2021-01-07</date><risdate>2021</risdate><abstract>Additional file 7: Figure S2. Gene Structures of Ehrlichia sp. HF Type IV Secretion System. Ehrlichia sp. HF encodes a Type IV secretion system. 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| subjects | Cell Biology Chemical Sciences not elsewhere classified Computational Biology FOS: Biological sciences FOS: Chemical sciences FOS: Clinical medicine FOS: Health sciences Genetics Hematology Immunology Infectious Diseases Microbiology Molecular Biology |
| title | Additional file 7 of Comparative Analysis of Genome of Ehrlichia sp. HF, a Model Bacterium to Study Fatal Human Ehrlichiosis |
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