Additional file 2 of Transcriptome-wide profiles of circular RNA and RNA-binding protein interactions reveal effects on circular RNA biogenesis and cancer pathway expression

Additional file 2 of Transcriptome-wide profiles of circular RNA and RNA-binding protein interactions reveal effects on circular RNA biogenesis and cancer pathway expression

Additional file 2: File S2. Bash script containing the code to extract all K562 total RNA-Seq samples from ENCODE. The following samples were obtained for K562: total cell (n = 4), nucleus (n = 1), nucleoplasm (n = 1), nucleolus (n = 1), chromatin (n = 1), membrane (n = 1), cytosol (n = 1), and inso...

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Hauptverfasser: Okholm, Trine Line Hauge, Shashank Sathe, Park, Samuel S., Kamstrup, Andreas Bjerregaard, Rasmussen, Asta Mannstaedt, Shankar, Archana, Chua, Zong Ming, Fristrup, Niels, Nielsen, Morten Muhlig, Vang, Søren, Dyrskjøt, Lars, Aigner, Stefan, Damgaard, Christian Kroun, Yeo, Gene W., Pedersen, Jakob Skou
Format: Dataset
Sprache:eng
Schlagworte:
Biochemistry
Biological Sciences not elsewhere classified
Biophysics
Cancer
Cell Biology
FOS: Biological sciences
FOS: Clinical medicine
FOS: Health sciences
Genetics
Immunology
Infectious Diseases
Molecular Biology
Virology
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Zusammenfassung:Additional file 2: File S2. Bash script containing the code to extract all K562 total RNA-Seq samples from ENCODE. The following samples were obtained for K562: total cell (n = 4), nucleus (n = 1), nucleoplasm (n = 1), nucleolus (n = 1), chromatin (n = 1), membrane (n = 1), cytosol (n = 1), and insoluble cytoplasmic fraction (n = 1).
DOI:10.6084/m9.figshare.13346547