Database relational table schema for MatchMiner

Copyright information:Taken from "MatchMiner: a tool for batch navigation among gene and gene product identifiers"Genome Biology 2003;4(4):R27-R27.Published online 25 Mar 2003PMCID:PMC154578.Copyright © 2003 Bussey et al.; licensee BioMed Central Ltd. This is an Open Access article: verbat...

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Hauptverfasser: Bussey, Kimberly J, Kane, David, Sunshine, Margot, Sudar Narasimhan, Nishizuka, Satoshi, Reinhold, William C, Zeeberg, Barry, , Ajay, Weinstein, John N
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Sprache:eng
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Zusammenfassung:Copyright information:Taken from "MatchMiner: a tool for batch navigation among gene and gene product identifiers"Genome Biology 2003;4(4):R27-R27.Published online 25 Mar 2003PMCID:PMC154578.Copyright © 2003 Bussey et al.; licensee BioMed Central Ltd. This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose, provided this notice is preserved along with the article's original URL. Logical database representation. Data are incorporated from the UCSC Human Genome Build, LocusLink, UniGene, OMIM, and the Affymetrix annotation sets for HU95 and HU133 chips. Each candidate gene is assigned a gene index in the GeneIdx table. These gene indexes are used as keys for all of the MatchMiner operations. The number of many-to-many relationships in the model illustrates the complexity of the data. Physical representation of the database. The implementation currently includes 14 tables with about 12 million rows.
DOI:10.6084/m9.figshare.1194