JASPAR 2024 TFBS LOLA databases - Part 3

This repository contains the third part of the JASPAR 2024 LOLA databases used by the JASPAR TFBS enrichment tool. For each organism, we provide the LOLA databases for all JASPAR 2024 TFBS sets as compressed directories containing a set of .RDS R objects. Databases are organised by genome assembly....

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Bibliographische Detailangaben
Hauptverfasser:	Rauluseviciute, Ieva, Puig, Rafael Riudavets, Blanc-Mathieu, Romain, Mondragon, Jaime Abraham Castro, Ferenc, Katalin, Vipin Kumar, Lemma, Roza Berhanu, Lucas, Jérémy, Chèneby, Jeanne, Baranasic, Damir, Khan, Aziz, Fornes, Oriol, Gundersen, Sveinung, Johansen, Morten, Hovig, Eivind, Lenhard, Boris, Sandelin, Albin, Wasserman, Wyeth W., Parcy, François, Mathelier, Anthony
Format:	Dataset
Sprache:	eng
Online-Zugang:	Volltext bestellen
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Beschreibung
Zusammenfassung:	This repository contains the third part of the JASPAR 2024 LOLA databases used by the JASPAR TFBS enrichment tool. For each organism, we provide the LOLA databases for all JASPAR 2024 TFBS sets as compressed directories containing a set of .RDS R objects. Databases are organised by genome assembly. The repository is split into different parts due to file sizes. Below are listed the different parts and the genome assemblies for which they have TFBSs: Part 1: araTha1, ce10, ce11, ci3, danRer11, dm6, sacCer3. Part 2: hg38. Part 3: mm39.
DOI:	10.5281/zenodo.8342387