Example input for MAPP workflow

Example input for MAPP workflow

Small test dataset for MAPP workflow: 5mln reads sampled from two paired-end RNA-seq samples of the GEO record: GSE69656 100 arbitrarily chosen Position Weight Matrices for RNA binding proteins and their sequence logos configuration template for the workflow (YAML) experiment design table (TSV) Geno...

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Bibliographische Detailangaben
1. Verfasser: Maciej, Bak
Format: Dataset
Sprache:eng
Schlagworte:
Bioinformatics
Data
FOS: Computer and information sciences
RNA-Seq
Online-Zugang:Volltext bestellen
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Beschreibung
Zusammenfassung:Small test dataset for MAPP workflow: 5mln reads sampled from two paired-end RNA-seq samples of the GEO record: GSE69656 100 arbitrarily chosen Position Weight Matrices for RNA binding proteins and their sequence logos configuration template for the workflow (YAML) experiment design table (TSV) Genomic annotation for human: chr21 (GTF) Genomic sequence for human: chr21 (FASTA) PolyAsite Atlas 2.0 annotation: chr21 (BED)
DOI:10.5281/zenodo.5566676