Multiscale phase separation by percolation model with the single chromatin loop resolution

Multiscale phase separation by percolation model with the single chromatin loop resolution

GM12878.CTCF.clusters all_edges.csv:- This file contains the set of whole-genome chromatin interactions detected using the ChIA-PET method for CTCF protein that was used in our project. GM12878_subcompartments.csv:- Contains the bins classified into compartments as per Rao et.al. paper. hg19_PET2+_f...

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Hauptverfasser: Sengupta, Kaustav, Denkiewicz, Michał, Szczepińska, Teresa, Mollah, Ayatullah Faruk, Plewczyński, Dariusz
Format: Dataset
Sprache:eng
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Zusammenfassung:GM12878.CTCF.clusters all_edges.csv:- This file contains the set of whole-genome chromatin interactions detected using the ChIA-PET method for CTCF protein that was used in our project. GM12878_subcompartments.csv:- Contains the bins classified into compartments as per Rao et.al. paper. hg19_PET2+_featuretable.tar.gz:- Contains tab-separated files for features sets calculated over loops for each chromosome. anchors_hg19_PET2+_featuretable.tar.gz:- Contains tab-separated files for features sets calculated over anchors for each chromosome.
DOI:10.5281/zenodo.4719151