Inferring allele-specific copy number aberrations and tumor phylogeography from spatially resolved transcriptomics (output data)

Inferring allele-specific copy number aberrations and tumor phylogeography from spatially resolved transcriptomics (output data)

This contains the output results of CalicoST (inferred CNAs and cancer clones), results of comparison methods, and CNAs inferred from WES data of 13 samples across four cancer types. In this updated version, we also included the simulated data and the results from CalicoST and other methods in Calic...

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Hauptverfasser: Ma, Cong, Balaban, Metin, Liu, Jingxian, Chen, Siqi, Wilson, Michael, Sun, Christopher, Ding, Li, Raphael, Benjamin
Format: Dataset
Sprache:eng
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Zusammenfassung:This contains the output results of CalicoST (inferred CNAs and cancer clones), results of comparison methods, and CNAs inferred from WES data of 13 samples across four cancer types. In this updated version, we also included the simulated data and the results from CalicoST and other methods in CalicoST_simulation_deposit.zip. README contains the details of deposited files.
DOI:10.5281/zenodo.13667151