Data from: Correction of preferred-orientation induced distortion in cryo-electron microscopy maps
Reconstruction maps of cryo-electron microscopy (cryo-EM) exhibit distortion when the cryo-EM dataset is incomplete, usually caused by unevenly distributed orientations. Prior efforts had been attempted to address this preferred orientation problem using tilt-collection strategy, modifications to gr...
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Zusammenfassung: | Reconstruction maps of cryo-electron microscopy (cryo-EM) exhibit
distortion when the cryo-EM dataset is incomplete, usually caused by
unevenly distributed orientations. Prior efforts had been attempted to
address this preferred orientation problem using tilt-collection strategy,
modifications to grids or to air-water-interfaces. However, these
approaches often require time-consuming experiments and the effect was
always protein dependent. Here, we developed a procedure containing
removing mis-aligned particles and an iterative reconstruction method
based on signal-to-noise ratio of Fourier component to correct such
distortion by recovering missing data using a purely computational
algorithm. This procedure called Signal-to-Noise Ratio Iterative
Reconstruction Method (SIRM) was applied on incomplete datasets of various
proteins to fix distortion in cryo-EM maps and to a more isotropic
resolution. In addition, SIRM provides a better reference map for further
reconstruction refinements, resulting in an improved alignment, which
ultimately improves map quality and benefits model building. |
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DOI: | 10.5061/dryad.73n5tb354 |