Full output GWAS female

We infected female flies from 94 of the DGRP lines with 104 plaque-forming units (PFU) WNV-Kun by intrathoracic injection and determined their mortality rates as compared to flies treated with buffer only (mock infection). We monitored survival daily for 30 days and calculated the hazard ratio as a metric of survival. We then used the log of the hazard ratio as the quantitative phenotype for the GWAS, as described (Chow et al., 2013).