Multi‐input CRISPR / C as genetic circuits that interface host regulatory networks

Genetic circuits require many regulatory parts in order to implement signal processing or execute algorithms in cells. A potentially scalable approach is to use dC as9, which employs small guide RNA s (sgRNAs) to repress genetic loci via the programmability of RNA : DNA base pairing. To this end, we...

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Veröffentlicht in:Molecular systems biology 2014-11, Vol.10 (11)
Hauptverfasser: Nielsen, Alec AK, Voigt, Christopher A
Format: Artikel
Sprache:eng
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Zusammenfassung:Genetic circuits require many regulatory parts in order to implement signal processing or execute algorithms in cells. A potentially scalable approach is to use dC as9, which employs small guide RNA s (sgRNAs) to repress genetic loci via the programmability of RNA : DNA base pairing. To this end, we use dC as9 and designed sgRNAs to build transcriptional logic gates and connect them to perform computation in living cells. We constructed a set of NOT gates by designing five synthetic Escherichia coli σ 70 promoters that are repressed by corresponding sgRNAs, and these interactions do not exhibit crosstalk between each other. These sgRNAs exhibit high on‐target repression (56‐ to 440‐fold) and negligible off‐target interactions (
ISSN:1744-4292
1744-4292
DOI:10.15252/msb.20145735