Abstract 2209: Characterization of underlying genomic features among African ancestry populations diagnosed with chronic lymphocytic leukemia

Chronic lymphocytic leukemia (CLL) is a neoplastic disease of mature B-cells with a highly heterogeneous clinical course. While European ancestry (EA) populations present an increased incidence of CLL, African ancestry (AA) populations have a younger median age of onset, higher frequency of adverse...

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Veröffentlicht in:Cancer research (Chicago, Ill.) Ill.), 2021-07, Vol.81 (13_Supplement), p.2209-2209
Hauptverfasser: de Campos, Cecilia Bonolo, O'Brien, Daniel R., McCabe, Chantal E., Yan, Huihuang, Kleinstern, Geffen, Wang, Zhiquan, Bruins, Laura A., Allmer, Cristine, Boddicker, Nicholas J., Secreto, Charla R., Norman, Aaron D., Tian, Shulan, Rabe, Kari G., Call, Timothy G., Parikh, Sameer A., Leis, Jose F., Ding, Wei, Furman, Richard, Weinberg, J Brice, Cerhan, James R., Vachon, Celine M., Kay, Neil E., Slager, Susan L., Braggio, Esteban
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Sprache:eng
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Zusammenfassung:Chronic lymphocytic leukemia (CLL) is a neoplastic disease of mature B-cells with a highly heterogeneous clinical course. While European ancestry (EA) populations present an increased incidence of CLL, African ancestry (AA) populations have a younger median age of onset, higher frequency of adverse prognostic factors, and inferior clinical outcomes. Despite the considerable effort to characterize the genetic landscape of CLL, AA are overwhelmingly underrepresented. Our hypothesis is that the clinical differences observed between AA and EA populations are, in part, explained by underlying genetic features. To address this imbalance, we identified 90 AA patients diagnosed with CLL, 64% of which were untreated at sample collection. RNA and DNA were extracted from CD5+/CD19+ clonal B-cells. We performed mRNA-seq and targeted sequencing in 59 recurrently mutated somatic CLL driver genes. Differentially expressed genes were identified using edgeR. Data was compared to our previously analyzed EA CLL cohort (N=445). The median age at diagnosis was 59 years for AA and 66 for EA and 74% of AA and 50% of EA had unmutated IGHV (u-IGHV) status. When evaluating the entire AA and EA cohorts, there was a significant increased frequency of mutations in TP53, SF3B1, and NFKBIE, identified in 29%, 24%, and 20% of AA CLLs, compared to 5%, 9%, and 9%, respectively, in EA CLLs (p
ISSN:0008-5472
1538-7445
DOI:10.1158/1538-7445.AM2021-2209