Complete Genome Sequence of Bifidobacterium angulatum GT102: Potential Genes and Systems of Communication with Host
We carried out the full genome sequencing of Bifidobacterium angulatum GT102. B. angulatum is rare species in the human gut microbiota, compared to the Bifidobacterium longum and Bifidobacterium adolescentis. In this regard, we investigated the genes of B. angulatum GT102 that are supposedly involve...
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Veröffentlicht in: | Russian journal of genetics 2019-07, Vol.55 (7), p.847-864 |
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Sprache: | eng |
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Zusammenfassung: | We carried out the full genome sequencing of
Bifidobacterium angulatum
GT102.
B. angulatum
is rare species in the human gut microbiota, compared to the
Bifidobacterium longum
and
Bifidobacterium adolescentis.
In this regard, we investigated the genes of
B. angulatum
GT102 that are supposedly involved in the interaction with the host. Our analysis revealed an interesting histidine kinase HK10 belonging to the family of kinases, which can be bacterial adrenergic receptors. We discovered the PFNA cluster comprising a gene encoding fibronectin type III domain-containing protein having cytokine receptor motifs. The products of this cluster are possibly capable of interacting with human cytokines. Moreover genome of
B. angulatum
GT102 contains gene cluster, involved in the production of cell surface-associated capsular exopolysaccharides, that has unique genetic structure. The obtained results provided information regarding some undescribed characteristics of
B. angulatum
species and also help to better understand in a comparative aspect its communication characteristics. |
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ISSN: | 1022-7954 1608-3369 |
DOI: | 10.1134/S1022795419070160 |