Development of a Tetraplex PCR Assay for CYP 2D6 Genotyping in Degraded DNA Samples
CYP 2D6 polymorphism analysis is gaining increasing interest in forensic pharmacogenetics. Nevertheless, DNA recovered from forensic samples could be of poor quality and not suitable for long polymerase chain reaction required to type CYP 2D6 gene prior to SN aPshot minisequencing analysis performed...
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Veröffentlicht in: | Journal of forensic sciences 2014-05, Vol.59 (3), p.690-695 |
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Hauptverfasser: | , , , , , |
Format: | Artikel |
Sprache: | eng |
Online-Zugang: | Volltext |
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Zusammenfassung: | CYP
2D6
polymorphism analysis is gaining increasing interest in forensic pharmacogenetics. Nevertheless,
DNA
recovered from forensic samples could be of poor quality and not suitable for long polymerase chain reaction required to type
CYP
2D6
gene prior to
SN
aPshot minisequencing analysis performed to define alleles with different enzymatic activity. We developed and validated following the guidelines of the Scientific Working Group on
DNA
Analysis Methods a tetraplex
PCR
yielding four amplicons of 597, 803, 1142, and 1659 bp encompassing the entire
CYP
2D6
gene to analyze eleven
SNP
positions by
SN
aPshot minisequencing. Concordance, sensitivity, and specificity were assessed. The method, applied to thirty‐two forensic samples failed to amplify with long
PCR
, allowed the amplification of
CYP
2D6
gene in 62.5% of degraded samples. The new tetraplex
PCR
appears a suitable method for
CYP
2D6
analysis in forensic pharmacogenetics. |
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ISSN: | 0022-1198 1556-4029 |
DOI: | 10.1111/1556-4029.12358 |