The complete chloroplast genome of Korean cultivar 'Harmony' (Prunus salicina × Prunus armeniaca)

The complete chloroplast genome of Korean cultivar 'Harmony' (Prunus salicina × Prunus armeniaca)

Prunus Linnaeus 1753 species include many economically important fruit crops, of which plumcot is generated by inter-species crossing between Prunus salicina Lindley 1830 × Prunus armeniaca Linnaeus 1753. In this study, the complete chloroplast genome of Korean plumcot cultivar 'Harmony' w...

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Veröffentlicht in:Mitochondrial DNA. Part B. Resources 2022-10, Vol.7 (10), p.1820-1822
Hauptverfasser: Kim, Se Hee, Kwon, Jung-hyun, Cho, Kang Hee, Jun, Ji Hae, Shin, Il Sheob
Format: Artikel
Sprache:eng
Schlagworte:
Bioinformatics
chloroplast genome
Chloroplasts
Cultivars
Genomes
Harmony
Horticulture
Korean cultivar
Mitochondrial DNA
Phylogenetics
Phylogeny
Plastome Announcement
Plumcot
Proteins
Prunus armeniaca
Prunus salicina
rRNA
Rural development
Science
Transfer RNA
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Zusammenfassung:Prunus Linnaeus 1753 species include many economically important fruit crops, of which plumcot is generated by inter-species crossing between Prunus salicina Lindley 1830 × Prunus armeniaca Linnaeus 1753. In this study, the complete chloroplast genome of Korean plumcot cultivar 'Harmony' was characterized through the de novo assembly of Nanopore and Illumina sequencing data. The chloroplast genome is a circular molecule of 157,916 bp length with 36.75% GC content and has a total of 113 genes including 79 protein-coding genes, 30 transfer RNA genes, and four ribosomal RNA genes. Phylogenetic analysis with protein-coding sequences of chloroplast genome revealed that 'Harmony' showed closer to P. salicina than P. armeniaca.
ISSN:2380-2359
2380-2359
DOI:10.1080/23802359.2022.2132839