Correlation of temperature dependence of hydride kinetic isotope effects with donor-acceptor distances in two solvents of different polarities
Recently observed nearly temperature ( T )-independent kinetic isotope effects (KIEs) in wild-type enzymes and T -dependent KIEs in variants were used to suggest that H-tunneling in enzymes is assisted by the fast protein vibrations that help sample short donor-acceptor distances (DADs). This suppor...
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Veröffentlicht in: | Organic & biomolecular chemistry 2023-06, Vol.21 (24), p.59-597 |
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Zusammenfassung: | Recently observed nearly temperature (
T
)-independent kinetic isotope effects (KIEs) in wild-type enzymes and
T
-dependent KIEs in variants were used to suggest that H-tunneling in enzymes is assisted by the fast protein vibrations that help sample short donor-acceptor distances (DADs). This supports the recently proposed role of protein vibrations in DAD sampling catalysis. However, use of
T
-dependence of KIEs to suggest DAD sampling associated with protein vibrations is debated. We have formulated a hypothesis regarding the correlation and designed experiments in solution to investigate it. The hypothesis is, a more rigid system with shorter DAD
TRS
's at the tunneling ready states (TRSs) gives rise to a weaker
T
-dependence of KIEs,
i.e.
, a smaller Δ
E
a
(=
E
aD
−
E
aH
). In a former work, the solvent effects of acetonitrile
versus
chloroform on the Δ
E
a
of NADH/NAD
+
model reactions were determined, and the DAD
PRC
's of the productive reactant complexes (PRCs) were computed to substitute the DAD
TRS
for the DAD
TRS
-Δ
E
a
correlation study. A smaller Δ
E
a
was found in the more polar acetonitrile where the positively charged PRC is better solvated and has a shorter DAD
PRC
, indirectly supporting the hypothesis. In this work, the TRS structures of different DAD
TRS
's for the hydride tunneling reaction from 1,3-dimethyl-2-phenylimidazoline to 10-methylacridinium were computed. The N-CH
3
/CD
3
secondary KIEs on both reactants were calculated and fitted to the observed values to find the DAD
TRS
order in both solutions. It was found that the equilibrium DAD
TRS
is shorter in acetonitrile than in chloroform. Results directly support the DAD
TRS
-Δ
E
a
correlation hypothesis as well as the explanation that links
T
-dependence of KIEs to DAD sampling catalysis in enzymes.
Shorter donor-acceptor distances (DADs) in hydride transfer reactions give rise to a weaker temperature (
T
) dependence of KIEs. This supports the debated proposal that links
T
-dependence of KIEs to DAD sampling catalysis studies in enzymes. |
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ISSN: | 1477-0520 1477-0539 1477-0539 |
DOI: | 10.1039/d3ob00718a |