Hypergraph Analysis Toolbox for Chromosome Conformation

Hypergraph Analysis Toolbox for Chromosome Conformation

Recent advances in biological technologies, such as multi-way chromosome conformation capture (3C), require development of methods for analysis of multi-way interactions. Hypergraphs are mathematically tractable objects that can be utilized to precisely represent and analyze multi-way interactions....

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Veröffentlicht in:arXiv.org 2022-12
Hauptverfasser: Pickard, Joshua, Chen, Can, Rahmy Salman, Cooper Stansbury, Sion, Kim, Surana, Amit, Bloch, Anthony, Rajapakse, Indika
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Chromosomes
Graph theory
Quantitative Biology - Quantitative Methods
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container_title arXiv.org
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creator Pickard, Joshua
Chen, Can
Rahmy Salman
Cooper Stansbury
Sion, Kim
Surana, Amit
Bloch, Anthony
Rajapakse, Indika
description Recent advances in biological technologies, such as multi-way chromosome conformation capture (3C), require development of methods for analysis of multi-way interactions. Hypergraphs are mathematically tractable objects that can be utilized to precisely represent and analyze multi-way interactions. Here we present the Hypergraph Analysis Toolbox (HAT), a software package for visualization and analysis of multi-way interactions in complex systems.
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subjects Chromosomes
Graph theory
Quantitative Biology - Quantitative Methods
title Hypergraph Analysis Toolbox for Chromosome Conformation
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