Enumerative and Distributional Results for $d$-combining Tree-Child Networks
Tree-child networks are one of the most prominent network classes for modeling evolutionary processes which contain reticulation events. Several recent studies have addressed counting questions for bicombining tree-child networks in which every reticulation node has exactly two parents. We extend th...
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Zusammenfassung: | Tree-child networks are one of the most prominent network classes for
modeling evolutionary processes which contain reticulation events. Several
recent studies have addressed counting questions for bicombining tree-child
networks in which every reticulation node has exactly two parents. We extend
these studies to $d$-combining tree-child networks where every reticulation
node has now $d\geq 2$ parents, and we study one-component as well as general
tree-child networks. For the number of one-component networks, we derive an
exact formula from which asymptotic results follow that contain a stretched
exponential for $d=2$, yet not for $d \geq 3$. For general networks, we find a
novel encoding by words which leads to a recurrence for their numbers. From
this recurrence, we derive asymptotic results which show the appearance of a
stretched exponential for all $d \geq 2$. Moreover, we also give results on the
distribution of shape parameters (e.g., number of reticulation nodes, Sackin
index) of a network which is drawn uniformly at random from the set of all
tree-child networks with the same number of leaves. We show phase transitions
depending on $d$, leading to normal, Bessel, Poisson, and degenerate
distributions. Some of our results are new even in the bicombining case. |
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DOI: | 10.48550/arxiv.2209.03850 |