Additional file 1 of Introme accurately predicts the impact of coding and noncoding variants on gene splicing, with clinical applications

Additional file 1: Table S1. Experimentally validated variants from SpliceVarDB used to train and test Introme. Table S2. Variants experimentally validated using RT-PCR for splice-altering changes by SA Pathology. Table S3. Features in Introme. Table S4. Variants used for allele frequency assessment...

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Hauptverfasser: Sullivan, Patricia J, Gayevskiy, Velimir, Davis, Ryan L, Wong, Marie, Mayoh, Chelsea, Mallawaarachchi, Amali, Hort, Yvonne, McCabe, Mark J, Beecroft, Sarah, Jackson, Matilda R, Arts, Peer, Dubowsky, Andrew, Laing, Nigel, Dinger, Marcel E, Scott, Hamish S, Oates, Emily, Pinese, Mark, Cowley, Mark J
Format: Dataset
Sprache:eng
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Zusammenfassung:Additional file 1: Table S1. Experimentally validated variants from SpliceVarDB used to train and test Introme. Table S2. Variants experimentally validated using RT-PCR for splice-altering changes by SA Pathology. Table S3. Features in Introme. Table S4. Variants used for allele frequency assessment. | External Organisations University of Sydney; Garvan Institute of Medical Research; Northern Sydney Local Health District; University of South Australia; South Australia Pathology; Queen Elizabeth II Medical Centre Trust | Associated Persons Patricia J. Sullivan (Creator); Velimir Gayevskiy (Creator); Ryan L. Davis (Creator); Marie Wong (Creator); Chelsea Mayoh (Creator); Amali Mallawaarachchi (Creator); Yvonne Hort (Creator); Mark J. McCabe (Creator); Matilda R. Jackson (Creator); Peer Arts (Creator); Andrew Dubowsky (Creator); Marcel E. Dinger (Creator); Hamish S. Scott (Creator); Emily Oates (Creator); Mark Pinese (Creator); Mark J. Cowley (Creator)
DOI:10.6084/m9.figshare.22914479.v1