Stage-dependent functions of dipeptidyl-peptidase 9 in mammary cancer progression and neuronal differentiation

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1. Verfasser: Heß, Lisa 1993- (VerfasserIn)
Format: Abschlussarbeit Buch
Sprache:English
Veröffentlicht: Freiburg im Breisgau Oktober 2022
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adam_text TABLE OF CONTENTS ZUSAMMENFASSUNG ................................................................................................................. I ABSTRACT ................................................................................................................................... III TABLE OF CONTENTS ..................................................................................................................... V LIST OF FIGURES ........................................................................................................................ VIII LIST OF TABLES ............................................................................................................................ X ABBREVIATIONS ......................................................................................................................... XI 1 INTRODUCTION ....................................................................................................................... 1 1.1 DIPEPTIDYL-PEPTIDASE IV FAMILY OF PROTEASES ............................................................... 1 1.2 BREAST CANCER ............................................................................................................ 3 1.3 BRAIN DEVELOPMENT AND NEURODEGENERATION .............................................................. 6 2 AIMS AND OBJECTIVES ........................................................................................................ 10 3 MATERIALS AND METHODS ................................................................................................... 11 3.1 MATERIALS AND CHEMICALS .......................................................................................... 11 3.1.1 CHEMICALS AND REAGENTS .................................................................................... 11 3.1.2 CONSUMABLES AND EQUIPMENT ............................................................................ 15 3.1.3 BUFFERS, SOLUTIONS, AND MEDIA ............................................................................ 16 3.2 MOUSE MODELS AND GENOTYPING ................................................................................ 17 3.2.1 APPROVALS .......................................................................................................... 17 3.2.2 MOUSE LINES ....................................................................................................... 17 3.2.3 ODOR AVOIDANCE TEST .......................................................................................... 18 3.2.4 GENOTYPING OF MICE ........................................................................................... 18 3.2.5 DROPLET DIGITALYY POLYMERASE CHAIN REACTION ..................................................... 19 3.2.6 PREPARATION OF MICE AND HISTOLOGY .................................................................... 20 3.2.7 IMMUNOHISTOCHEMISTRY AND IMMUNOFLUORESCENCE ............................................. 20 3.2.8 CARMINE ALUM STAINING ...................................................................................... 21 3.3 MOLECULAR CELL BIOLOGY AND BIOCHEMISTRY ................................................................. 21 3.3.1 CELL LINES ........................................................................................................... 21 V TABLE OF CONTENTS 3.3.2 CELL COUNTING ..................................................................................................... 23 3.3.3 QUANTITATIVE REAL-TIME REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION .......... 23 3.3.4 PROTEIN QUANTIFICATION ......................................................................................... 24 3.3.5 WESTERN BLOT ..................................................................................................... 24 3.3.6 DIPEPTIDYL PEPTIDASE ACTIVITY ASSAY ................................................................... 26 3.3.7 IMMUNOFLUORESCENCE OF 2D CULTURE ................................................................... 27 3.3.8 IMMUNOFLUORESCENCE OF 3D CULTURE ................................................................... 27 3.3.9 ANNEXIN V-BINDING ASSAY .................................................................................. 28 3.3.10 GAP CLOSURE ASSAY ............................................................................................ 28 3.3.11 LYSOTRACKER ASSAY ............................................................................................. 28 3.3.12 INVASION ASSAY .................................................................................................. 29 3.4 STATISTICS ................................................................................................................... 29 3.4.1 TCGA PATIENT DATA RETRIEVAL AND ANALYSIS ......................................................... 29 3.4.2 DATA PRESENTATION AND STATISTICS ........................................................................ 30 4 RESULTS ............................................................................................................................ 31 4.1 STAGE-DEPENDENT FUNCTIONS OF DPP9 IN MAMMARY CANCER PROGRESSION .................. 31 4.1.1 LOW DPP9 MRNA EXPRESSION CORRELATES WITH POOR OVERALL SURVIVAL OF BREAST CANCER PATIENTS ............................................................................................................... 31 4.1.2 DPP9 DEFICIENCY DELAYED TUMOR ONSET BUT ENHANCES METASTASES COUNT IN MMTV PYMT MICE ...................................................................................................................... 34 4.1.3 DPP9 DEFICIENCY STALLED TUMORIGENIC TRANSFORMATION AND PROMOTES TGF-SS1 INDUCED EMT OF MCF10ATET KRAS G12V SPHEROIDS .......................................................... 40 4.1.4 DPP9 DEFICIENCY PROMOTES MIGRATION AND INVASION OF MURINE PRIMARY BREAST TUMOR CELLS BY STABILIZATION OF ZEB1 ................................................................................ 45 4.2 DPP9 IN NEURONAL DIFFERENTIATION .............................................................................. 49 4.2.1 HOMOZYGOUS DPP9 DEFICIENCY REDUCES BODY AND BRAIN WEIGHT BUT INCREASES ODOR AVOIDANCE OF MICE ......................................................................................................... 49 4.2.2 DPP8/9 INHIBITION INCREASES SENSITIVITY TO THE SENOLYTIC AGENT NAVITOCLAX IN LUHMES CELLS ............................................................................................................... 52 4.2.3 DPP8/9 INHIBITION BLOCKS AUTOPHAGIC FLUX IN LUHMES CELLS .............................. 54 VI TABLE OF CONTENTS 5 DISCUSSION ....................................................................................................................... 60 5.1 STAGE-DEPENDENT FUNCTIONS OF DPP9 IN MAMMARY CANCER PROGRESSION ................... 60 5.1.1 DPP9 DEFICIENCY DURING TUMOR INITIATION DELAYS BREAST TUMOR ONSET ................. 60 5.1.2 DPP9 DEFICIENCY ENHANCES METASTATIC SPREAD OF BREAST TUMOR CELLS ............... 64 5.2 DPP9 IN NEURONAL DIFFERENTIATION .............................................................................. 68 5.2.1 HOMOZYGOUS DPP9 DEFICIENCY IN VIVO AND DPP8/9 INHIBITION IN VITRO INCREASED CELL DEATH OF NEURONS ...................................................................................................... 68 5.2.2 INHIBITION OF DPP8/9 IN THE LUHMES CELL LINE IMPAIRS AUTOPHAGIC LYSOSOME REFORMATION ...................................................................................................................... 72 6 REFERENCES ....................................................................................................................... 76 7 ACKNOWLEDGEMENT (DANKSAGUNG) ................................................................................... 89 8 APPENDIX ........................................................................................................................... A 8.1 CURRICULUM VITAE ......................................................................................................... A 8.1 SUPERVISION OF THESIS .................................................................................................. B 8.2 ATTENDED CONFERENCES ................................................................................................ B 8.3 ATTENDED COURSES ....................................................................................................... B 8.4 LIST OF PUBLICATIONS ..................................................................................................... C 8.5 DECLARATION (ERKLAERUNG) ............................................................................................. D VII
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spellingShingle Heß, Lisa 1993-
Stage-dependent functions of dipeptidyl-peptidase 9 in mammary cancer progression and neuronal differentiation
subject_GND (DE-588)4113937-9
title Stage-dependent functions of dipeptidyl-peptidase 9 in mammary cancer progression and neuronal differentiation
title_auth Stage-dependent functions of dipeptidyl-peptidase 9 in mammary cancer progression and neuronal differentiation
title_exact_search Stage-dependent functions of dipeptidyl-peptidase 9 in mammary cancer progression and neuronal differentiation
title_full Stage-dependent functions of dipeptidyl-peptidase 9 in mammary cancer progression and neuronal differentiation vorgelegt von Lisa Heß, geborene Lehmann
title_fullStr Stage-dependent functions of dipeptidyl-peptidase 9 in mammary cancer progression and neuronal differentiation vorgelegt von Lisa Heß, geborene Lehmann
title_full_unstemmed Stage-dependent functions of dipeptidyl-peptidase 9 in mammary cancer progression and neuronal differentiation vorgelegt von Lisa Heß, geborene Lehmann
title_short Stage-dependent functions of dipeptidyl-peptidase 9 in mammary cancer progression and neuronal differentiation
title_sort stage dependent functions of dipeptidyl peptidase 9 in mammary cancer progression and neuronal differentiation
topic_facet Hochschulschrift
url https://d-nb.info/1280435151/04
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