Membrane curvature as intrinsic self-organizing module regulates filopodia formation along the neuronal dendritic tree

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1. Verfasser: Mancinelli, Gloria 1991- (VerfasserIn)
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Veröffentlicht: Münster 2021
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adam_text TABLE OF CONTENTS PAGE LIST OF ABBREVIATIONS 1 LIST OF FIGURES 3 LIST OF TABLES 7 1. INTRODUCTION 8 1.1. NEUROSCIENCE: AN OVERVIEW 8 1.1.1 THE BRAIN, A BASIC SYNOPSIS 8 1.1.2 THE HIPPOCAMPUS: A MODEL SYSTEM IN NEUROSCIENCE 10 1.1.3 NEURONAL ARCHITECTURE: FUNCTION AND DEVELOPMENT 15 1.1.3.1 NEURONAL ARCHITECTURE 15 1.1.3.2 NEURONAL FUNCTION AND SYNAPTIC TRANSMISSION 17 1.1.3.3 NEURONAL DEVELOPMENT 21 1.1.3.4 SYNAPSE FORMATION VIA EXPLORATORY DENDRITIC FILOPODIA 22 1.1.3.5 FILOPODIA LIFE CYCLE 23 1.2. MEMBRANE CURVATURE AND SHAPE REMODELLING MECHANISMS 26 1.2.1 CURVATURE OF BIOLOGICAL MEMBRANES 26 1.2.1.1 LIPID MEMBRANES 26 1.2.1.2 MEMBRANE CURVATURE: INTRACELLULAR AND EXTRACELLULAR FORCES 28 1.2.2 MEMBRANE CURVATURE AND ACTIN DYNAMICS 33 1.2.2.1 ACTIN DYNAMICS FUNDAMENTALS 33 1.2.2.2 ACTIN DYNAMICS IN DENDRITIC FILOPODIA 36 1.2.3 MEMBRANE CURVATURE AND CURVATURE SENSITIVE PROTEINS 37 1.2.3.1 BAR DOMAINS AND MEMBRANE CURVATURE 38 1.2.3.2 BAR DOMAINS AND ACTIN DYNAMICS 38 1.2.3.3 BAR PROTEIN FUNCTION AND EXPRESSION IN HCNS 40 2. RATIONALE AND AIM OF THE DISSERTATION 45 GLORIA MANCINELLI DOCTORAL THESIS 3. MATERIALS AND METHODS 46 3.1 CELL CULTURE 46 3.1.1 PRIMARY HIPPOCAMPAL NEURONS 46 3.1.2 NIH 3T3 AND HELA CELL LINES 48 3.2 MOLECULAR BIOLOGY 48 3.2.1 FLUORESCENTLY TAGGED CONSTRUCTS 48 3.2.2 SIRNAS 49 3.2.3 FKBP AND MEOS3.2 CONSTRUCTS 50 3.2.4 CLONING 50 3.2.5 SDS PAGE AND WESTERN BLOT 54 3.3 TRANSFECTION AND IMMUNOFLUORESCENCE 58 3.3.1 TRANSFECTION: LIPOFECTAMINE 2000 58 3.3.2 IMMUNOFLUORESCENCE 59 3.4 FLUORESCENT MICROSCOPY 60 3.4.1 LIVE CELL IMAGING 60 3.4.2 Z STACKS ACQUISITIONS 61 3.4.3 TIRF ACQUISITIONS 61 3.5 SCANNING ELECTRON MICROSCOPY 61 3.6 LATTICE LIGHT SHEET MICROSCOPY 61 3.7 PALM 62 3.8 IMAGE ANALYSIS 62 3.9 STATISTICAL ANALYSIS 65 4. RESULTS 66 4.1 FILOPODIA DYNAMICS IS BIASED TOWARDS THIN DISTAL ENDS 66 4.2 MEMBRANE CURVATURE MEDIATES FILOPODIA ACTIVATOR CONCENTRATION ENRICHMENT 68 IV GLORIA MANCINELLI DOCTORAL THESIS 4.2.1 CURVATURE BIOSENSOR ACCUMULATION HOLDS FOR OTHER L-BAR MEMBERS 71 4.3 ENERGETIC CONSIDERATIONS ON FILOPODIA FORMATION PREDICT THE PRESENCE OF AN OPPOSITE MEMBRANE BIOSENSOR TO THE NEGATIVE DEFORMATION ACTIVATOR 75 4.4 ACTIVATOR/INHIBITOR DYNAMICS IS REGULATED ALONG NEURONAL ARCHITECTURE 77 4.4.1 BIOSENSORS OF CHOICE: CNS TISSUE EXPRESSION PROFILE 77 4.4.2 MEMBRANE CURVATURE REGULATES ACTIVATOR/INHIBITOR RATIO IN NEURONS 78 4.5 FILOPODIA INITIATION IS TUNED BY A LOCAL OPPOSITE CURVATURE CO-EXISTENCE 81 4.5.1 CLASSIFICATION OF DIFFERENT FILOPODIA POPULATIONS TO ESTABLISH THE INITIATION PHASE 81 4.5.2 BIOSENSORS OF OPPOSITE CURVATURE AFFINITY ENRICH AT INITIAL MEMBRANE DEFORMATION PRIOR TO FILOPODIA FORMATION 82 4.6 DOWNREGULATION OF ACTIVATOR AND INHIBITOR CHANGE FILOPODIA FORMATION IN THIN DENDRITIC PORTION 85 4.6.1 SUPPLEMENT: ANTIBODY STAINING CONTROL CONFIRMS SIRNA DOWNREGULATION EFFICIENCY 88 4.6.2 SUPPLEMENT: WESTERN BLOT CONTROL CONFIRMS SIRNA DOWNREGULATION EFFECT 89 4.7 MEMBRANE DEFORMATION UPON L-BAR INDUCTION AT THE MEMBRANE TRIGGERS FILOPODIA FORMATION 90 4.7.1 MEMBRANE DEFORMATION UPON L-BAR CID IS CONFIRMED IN TIRF AND IS SHOWED TO INDUCE ACTIN-CONTAINING FILOPODIA IN NEURONS 92 5. DISCUSSION 95 5.1 MEMBRANE CURVATURE GUIDES FILOPODIA DYNAMICS POSITIONING ALONG NEURONAL ARCHITECTURE 95 5.2 FILOPODIA CURVATURE-DEPENDENT ACTIVATOR DISTRIBUTES IN CORRELATION WITH CURVATURE INCREASE OF THE DENDRITIC TREE 97 5.3 GLOBAL MEMBRANE CURVATURE CONFORMATION INFLUENCES LOCAL CURVATURE-DEPENDENT EVENTS 99 5.4 FILOPODIA FORMATION IS ALTERED FOR ACTIVATOR/INHIBITOR RATIO DISTURBANCES 101 V GLORIA MANCINELLI DOCTORAL THESIS 5.5 NEURONAL ARCHITECTURE AN EXEMPLARY MODEL OF FUNCTIONAL MORPHOLOGY 103 6. CONCLUSIONS 109 7. FUTURE DIRECTIONS 111 8. REFERENCES 115 9. AKNOWLEDGMENTS 138 10. LEBENSLAUF 140 11. APPENDIX 142 VI
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spellingShingle Mancinelli, Gloria 1991-
Membrane curvature as intrinsic self-organizing module regulates filopodia formation along the neuronal dendritic tree
subject_GND (DE-588)4113937-9
title Membrane curvature as intrinsic self-organizing module regulates filopodia formation along the neuronal dendritic tree
title_auth Membrane curvature as intrinsic self-organizing module regulates filopodia formation along the neuronal dendritic tree
title_exact_search Membrane curvature as intrinsic self-organizing module regulates filopodia formation along the neuronal dendritic tree
title_full Membrane curvature as intrinsic self-organizing module regulates filopodia formation along the neuronal dendritic tree vorgelegt von Gloria Mancinelli
title_fullStr Membrane curvature as intrinsic self-organizing module regulates filopodia formation along the neuronal dendritic tree vorgelegt von Gloria Mancinelli
title_full_unstemmed Membrane curvature as intrinsic self-organizing module regulates filopodia formation along the neuronal dendritic tree vorgelegt von Gloria Mancinelli
title_short Membrane curvature as intrinsic self-organizing module regulates filopodia formation along the neuronal dendritic tree
title_sort membrane curvature as intrinsic self organizing module regulates filopodia formation along the neuronal dendritic tree
topic_facet Hochschulschrift
url https://d-nb.info/1238190227/04
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