Genome analyis current procedures and applications
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| Format: | Elektronisch E-Book |
| Sprache: | English |
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Wymondham
Caister Academic
[2014]
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Datensatz im Suchindex
| _version_ | 1819777527670898688 |
|---|---|
| adam_text | Genome Analysis
Current Procedures and Applications
Edited by
Maria S Poptsova
Weill Cornell Medical College
New York, USA
and
Moscow State University
Russia
l
Caister Academic Press
Contents
Contributors v
Preface ix
1 Identification of Structural Variation 1
Suzanne S Sindi and Benjamin J Raphael
2 Methods for RNA Isolation, Characterization and Sequencing
(RNA-Seq) 21
Paul Zumbo and Christopher E Mason
3 Transcriptome Reconstruction and Quantification from RNA
Sequencing Data 39
Sahar Al Seesi, Serghei Mangul, Adrian Caciula Alex Zelikovsky
and Ion Mandoiu
4 Identification of Small Interfering RNA from Next-generation
Sequencing Data 61
Thomas J Hardcastle
5 Motif Discovery and Motif Finding in ChlP-Seq Data 83
Ivan V Kulakovskiy and Vsevolod J Makeev
6 Mammalian Enhancer Prediction 101
Dongwon Lee and Michael A Beer
7 DNA Patterns for Nucleosome Positioning 121
llya loshikhes
8 Hypermethylation in Cancer 151
Marta Sanchez-Carbayo
9 Identification and Analysis of Transposable Elements in Genomic
Sequences 165
Laurent Modolo and EEmmanuelle Lerat
10 The Current State of Metagenomic Analysis 183
Pieter De Maayer, Angel Valverde and Don A Cowan
iv I Contents
11 Metatranscriptomics 221
Atsushi Ogura
12 Inferring Viral Quasispecies Spectra from Shotgun and Amplicon
Next-Generation Sequencing Reads 231
Irina Astrovskaya, Nicholas Mancuso, Bassam Tork, Serghei Mangul,
Alex Artyomenko, Pavel Skums, Lilia Ganova-Raeva, Ion Mandoiu
and Alex Zelikovsky
13 DNA Instability in Bacterial Genomes: Causes and Consequences 263
Pedro H Oliveira, Duarte M F Prazeres and Gabriel A Monteiro
14 Comparative Methods for RNA Structure Prediction 287
Eckart Bindewald and Bruce A Shapiro
15 Context-free Grammars and RNA Secondary Structure Prediction 307
Markus E Nebel and Anika Schulz
16 Stochastic Context-free Grammars and RNA Secondary Structure
Prediction 339
James W J Anderson
Index 367
Colour Plate A1
amp;
|
| any_adam_object | 1 |
| author2 | Poptsova, Maria S. |
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| contents | "In this book, an impressive array of expert authors highlight and review current advances in genome analysis. This volume provides an invaluable, up-to-date and comprehensive overview of the methods currently employed for next-generation sequencing (NGS) data analysis, highlights their problems and limitations, demonstrates the applications and indicates the developing trends in various fields of genome research.... An essential book for everyone involved in sequence data analysis, next-generation sequencing, high-throughput sequencing, RNA structure prediction, bioinformatics and genome analysis. An essential book for everyone involved in sequence data analysis, next-generation sequencing, high-throughput sequencing, RNA structure prediction, bioinformatics and genome analysis."-- |
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| dewey-full | 23 572.9 |
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| discipline | Biologie Theologie / Religionswissenschaften |
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| illustrated | Illustrated |
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| language | English |
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| spellingShingle | Genome analyis current procedures and applications "In this book, an impressive array of expert authors highlight and review current advances in genome analysis. This volume provides an invaluable, up-to-date and comprehensive overview of the methods currently employed for next-generation sequencing (NGS) data analysis, highlights their problems and limitations, demonstrates the applications and indicates the developing trends in various fields of genome research.... An essential book for everyone involved in sequence data analysis, next-generation sequencing, high-throughput sequencing, RNA structure prediction, bioinformatics and genome analysis. An essential book for everyone involved in sequence data analysis, next-generation sequencing, high-throughput sequencing, RNA structure prediction, bioinformatics and genome analysis."-- Science ukslc SCIENCE / Life Sciences / Biochemistry bisacsh Gene mapping fast Naturwissenschaft Gene mapping |
| title | Genome analyis current procedures and applications |
| title_auth | Genome analyis current procedures and applications |
| title_exact_search | Genome analyis current procedures and applications |
| title_full | Genome analyis current procedures and applications edited by Maria S. Poptsova |
| title_fullStr | Genome analyis current procedures and applications edited by Maria S. Poptsova |
| title_full_unstemmed | Genome analyis current procedures and applications edited by Maria S. Poptsova |
| title_short | Genome analyis |
| title_sort | genome analyis current procedures and applications |
| title_sub | current procedures and applications |
| topic | Science ukslc SCIENCE / Life Sciences / Biochemistry bisacsh Gene mapping fast Naturwissenschaft Gene mapping |
| topic_facet | Science SCIENCE / Life Sciences / Biochemistry Gene mapping Naturwissenschaft |
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