Gene essentiality methods and protocols

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Sprache:English
Veröffentlicht: New York Humana Press 2015
Schriftenreihe:Methods in molecular biology 1279
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Datensatz im Suchindex

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adam_text Titel: Gene essentiality Autor: Lu, Long Jason Jahr: 2015 Contents Preface.......................................................... v Contributors.......................................................... ix 1 Microarray Transposon Tracking for the Mapping of Conditionally Essential Genes in Campylobacter jejuni............................. 1 Martin Stahl and Alain Stintzi 2 Identifying Essential Streptococcus sanguinis Genes Using Genome-Wide Deletion Mutation............................................. 15 Lei Chen, Xiuchun Ge, and Ping Xu 3 Defining Essential Genes and Identifying Virulence Factors of Porphyromonasgingivalis by Massively Parallel Sequencing of Transposon Libraries (Tn-seq).................................. 25 Brian A. Klein, Margaret J. Duncan, and Linden T. Hu 4 Identification of Essential Genes and Synthetic Lethal Gene Combinations in Escherichia coli K-12.......................................... 45 Hirotada Mori, Tomoya Baba, Katsushi Tokoyama, Rikiya Takeuchi, Wataru Nomura, Kazuichi Makishi, Tuta Otsuka, Hitomi Dose, and Barry L. Wanner 5 Identification of Genes Essential for Leptospirosis...................... 67 Thanatchaporn Bartpho and Gerald L. Murray 6 Identifying Essential Genes in Mycobacterium tuberculosis by Global Phenotypic Profiling.................................... 79 Jarukit E. Long, Michael Dejesus, Doyle Ward, Richard E. Baker, Thomas Ioerger, and Christopher M. Sassetti 7 Essential Genes in the Infection Model of Pseudomonas aeruginosa-PCR-Based Signature-Tagged Mutagenesis.................................... 97 Irena Kukavica-Ibrulj and Roger C. Levesque 8 Genome-Wide Synthetic Genetic Screening by Transposon Mutagenesis in Candida albicans............................................ 125 Brooke N. Horton and Anuj Kumar 9 An Integrated Machine-Learning Model to Predict Prokaryotic Essential Genes................................................ 137 Jingyuan Deng 10 A Statistical Framework for Improving Genomic Annotations of Transposon Mutagenesis (TM) Assigned Essential Genes.............. 153 Jingyuan Deng 11 A Proposed Essential Gene Discovery Pipeline: A Campylobacter jejuni Case Study................................. 167 Mark Router, Duncan J.H. Gaskin, and Aline Metris vii viii Contents 12 Computational Prediction of Essential Metabolic Genes Using Constraint-Based Approaches................................ 183 Georg Easier 13 Three Computational Tools for Predicting Bacterial Essential Genes........ 205 Feng-Biao Guo, Yuan-Hong Ye, Lu-Wen Ning, and Wen Wei 14 Gene Essentiality Analysis Based on DEG 10, an Updated Database of Essential Genes.............................................. 219 Feng Gao, Hao Luo, Chun-Ting Zhang, and Ren Zhang 15 Discovering Essential Domains in Essential Genes...................... 235 Yulan 1m, Yao Lu, Jingyuan Deng, Hui Lu, and Long Jason Lu Index............................................................... 247
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series2 Methods in molecular biology
Springer protocols
spelling Gene essentiality methods and protocols ed. by Long Jason Lu,...
New York Humana Press 2015
XI,248 S. Ill., graph. Darst. 26 cm
txt rdacontent
n rdamedia
nc rdacarrier
Methods in molecular biology 1279
Springer protocols
Bibliogr. en fin de chapitre. Index
Génétique
Génétique microbienne / méthodes
Gènes essentiels
Techniques génétiques
Techniques microbiologiques
Génétique médicale
Bactéries / génétique
Biologie informatique
Génétique médicale ram
Bioinformatique ram
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Methods in molecular biology 1279 (DE-604)BV035362695 1279
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spellingShingle Gene essentiality methods and protocols
Methods in molecular biology
Génétique
Génétique microbienne / méthodes
Gènes essentiels
Techniques génétiques
Techniques microbiologiques
Génétique médicale
Bactéries / génétique
Biologie informatique
Génétique médicale ram
Bioinformatique ram
Nachweis (DE-588)4115334-0 gnd
Gen (DE-588)4128987-0 gnd
Methode (DE-588)4038971-6 gnd
subject_GND (DE-588)4115334-0
(DE-588)4128987-0
(DE-588)4038971-6
(DE-588)4143413-4
title Gene essentiality methods and protocols
title_auth Gene essentiality methods and protocols
title_exact_search Gene essentiality methods and protocols
title_full Gene essentiality methods and protocols ed. by Long Jason Lu,...
title_fullStr Gene essentiality methods and protocols ed. by Long Jason Lu,...
title_full_unstemmed Gene essentiality methods and protocols ed. by Long Jason Lu,...
title_short Gene essentiality
title_sort gene essentiality methods and protocols
title_sub methods and protocols
topic Génétique
Génétique microbienne / méthodes
Gènes essentiels
Techniques génétiques
Techniques microbiologiques
Génétique médicale
Bactéries / génétique
Biologie informatique
Génétique médicale ram
Bioinformatique ram
Nachweis (DE-588)4115334-0 gnd
Gen (DE-588)4128987-0 gnd
Methode (DE-588)4038971-6 gnd
topic_facet Génétique
Génétique microbienne / méthodes
Gènes essentiels
Techniques génétiques
Techniques microbiologiques
Génétique médicale
Bactéries / génétique
Biologie informatique
Bioinformatique
Nachweis
Gen
Methode
Aufsatzsammlung
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