Pattern recognition in bioinformatics 6th IAPR international conference, PRIB 2011 ; Delft, The Netherlands, November 2 - 4, 2011 ; proceedings
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| Sprache: | English |
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Berlin [u.a.]
Springer
2011
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| Schriftenreihe: | Lecture notes in computer science
7036 |
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| 245 | 1 | 0 | |a Pattern recognition in bioinformatics |b 6th IAPR international conference, PRIB 2011 ; Delft, The Netherlands, November 2 - 4, 2011 ; proceedings |c Marco Loog ... (eds.) |
| 264 | 1 | |a Berlin [u.a.] |b Springer |c 2011 | |
| 300 | |a XII, 344 S. |b Ill., graph. Darst. | ||
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| adam_text | IMAGE 1
TABLE OF CONTENTS
SESSION 1: CLUSTERING A NEW FRAMEWORK FOR CO-CLUSTERING OF GENE
EXPRESSION DATA 1 SHUZHONG ZHANG, KUN WANG, BILIAN CHEN, AND XIUZHEN
HUANG
BICLUSTERING OF EXPRESSION MICROARRAY DATA USING AFFINITY PROPAGATION 13
ALESSANDRO FARINELLI, MATTEO DENITTO, AND MANUELE BICEGO
A TWO-WAY BAYESIAN MIXTURE MODEL FOR CLUSTERING IN M E T A G E N O M I C
S . .. 25 SHRUTHI PRABHAKARA AND RAJ ACHARYA
CRISPY-CUDA: COMPUTING SPECIES RICHNESS IN 16S RRNA PYROSEQUENCING
DATASETS WITH CUDA 37
ZEJUN ZHENG, THUY-DIEM NGUYEN, AND BERTIL SCHMIDT
SESSION 2: BIOMARKER SELECTION AND CLASSIFICATION (1)
NEW GENE SUBSET SELECTION APPROACHES BASED ON LINEAR SEPARATING GENES
AND GENE-PAIRS 50
AMIRALI JAFARIAN, ALIOUNE NGOM, AND LUIS RUEDA
IDENTIFICATION OF BIOMARKERS FOR PROSTATE CANCER PROGNOSIS USING A NOVEL
TWO-STEP CLUSTER ANALYSIS 63
XIN CHEN, SHIZHONG XU, YIPENG WANG, MICHAEL MCCLELLAND, ZHENYU JIA, AND
DAN MERCOLA
RENAL CANCER CELL CLASSIFICATION USING GENERATIVE EMBEDDINGS AND
INFORMATION THEORETIC KERNELS 75
MANUELE BICEGO, AYDM ULAS, PETER SCHUEFFLER, UMBERTO CASTELLANI, VITTORIO
MURINO, ANDRE MARTINS, PEDRO AGUIAR, AND MARIO FIGUEIREDO
SESSION 3: NETWORK INFERENCE AND ANALYSIS (1)
INTEGRATION OF EPIGENETIC DATA IN BAYESIAN NETWORK MODELING OF GENE
REGULATORY NETWORK 87
JIE ZHENG, ITI CHATURVEDI, AND JAGATH C. RAJAPAKSE
METABOLIC PATHWAY INFERENCE FROM TIME SERIES DATA: A NON ITERATIVE
APPROACH 97
LAURA ASTOLA, MARIAN GROENENBOOM, VICTORIA GOMEZ ROLDAN, FRED VAN
EEUWIJK, ROBERT D. HALL, ARNAUD BOVY, AND JAAP MOLENAAR
BIBLIOGRAFISCHE INFORMATIONEN HTTP://D-NB.INFO/1015580696
DIGITALISIERT DURCH
IMAGE 2
X TABLE OF CONTENTS
HIGHLIGHTING METABOLIC STRATEGIES USING NETWORK ANALYSIS OVER STRAIN
OPTIMIZATION RESULTS 109
JOSE PEDRO PINTO, ISABEL ROCHA, AND MIGUEL ROCHA
SESSION 4: BIOMARKER SELECTION AND CLASSIFICATION (2)
WRAPPER- AND ENSEMBLE-BASED FEATURE SUBSET SELECTION METHODS FOR
BIOMARKER DISCOVERY IN TARGETED METABOLOMICS 121
HOLGER FRANKEN, RAINER LEHMANN, HANS-ULRICH HAERING, ANDREAS PRITSCHE,
NORBERT STEFAN, AND ANDREAS ZEIL
ENSEMBLE LOGISTIC REGRESSION FOR FEATURE SELECTION 133
ROMAN ZAKHAROV AND PIERRE DUPONT
GENE SELECTION IN TIME-SERIES GENE EXPRESSION DATA 145
PREM RAJ ADHIKARI, BIMAL BABU UPADHYAYA, CHEN MENG, AND JAAKKO HOLLMEN
MULTI-TASK DRUG BIOACTIVITY CLASSIFICATION WITH GRAPH LABELING ENSEMBLES
157
HONGYU SU AND JUHO ROUSU
SESSION 5: IMAGE ANALYSIS (1)
A BILINEAR INTERPOLATION BASED APPROACH FOR OPTIMIZING HEMATOXYLIN AND
EOSIN STAINED MICROSCOPICAL IMAGES 168
KAYA KURU AND SERIAN GIRGIN
AUTOMATIC LOCALIZATION OF INTEREST POINTS IN ZEBRAFISH IMAGES WITH
TREE-BASED METHODS 179
OLIVIER STERN, RAPHAEL MAREE, JESSICA ACETO, NATHALIE JEANRAY, MARC
MULLER, LOUIS WEHENKEL, AND PIERRE GEURTS
SESSION 6: BIOMARKER SELECTION AND CLASSIFICATION (3)
A NEW GENE SELECTION METHOD BASED ON RANDOM SUBSPACE ENSEMBLE FOR
MICROARRAY CANCER CLASSIFICATION 191
GIULIANO ARMANO, CAMELIA CHIRA, AND NIMA HATAMI
A COMPARISON ON SCORE SPACES FOR EXPRESSION MICROARRAY DATA
CLASSIFICATION 202
ALESSANDRO PERINA, PIETRO LOVATO, MARCO CRISTANI, AND MANUELE BICEGO
IMAGE 3
TABLE OF CONTENTS XI
FLUX MEASUREMENT SELECTION IN METABOLIC NETWORKS 214
WOUT MEGCHELENBRINK, MARTIJN HUYNEN, AND ELENA MARCHIORI
SESSION 7: NETWORK INFERENCE AND ANALYSIS (2)
LAGRANGIAN RELAXATION APPLIED TO SPARSE GLOBAL NETWORK ALIGNMENT . ..
225 MOHAMMED EL-KEBIR, JAAP HERINGA, AND GUNNAR W. KLAU
STABILITY OF INFERRING GENE REGULATORY STRUCTURE WITH DYNAMIC BAYESIAN
NETWORKS 237
JAGATH C. RAJAPAKSE AND ITI CHATURVEDI
INTEGRATING PROTEIN FAMILY SEQUENCE SIMILARITIES WITH GENE EXPRESSION TO
FIND SIGNATURE GENE NETWORKS IN BREAST CANCER METASTASIS 247 SEPIDEH
BABAEI, ERIK VAN DEN AKKER, JEROEN DE RIDDER, AND MARCEL REINDERS
SESSION 8: SEQUENCE, STRUCTURE, AND INTERACTIONS
ESTIMATING THE CLASS POSTERIOR PROBABILITIES IN PROTEIN SECONDARY
STRUCTURE PREDICTION 260
YANN GUERMEUR AND FABIENNE THOMARAT
SHAPE MATCHING BY LOCALIZED CALCULATIONS OF QUASI-ISOMETRIC SUBSETS,
WITH APPLICATIONS TO THE COMPARISON OF PROTEIN BINDING PATCHES 272
FREDERIC CAZAIS AND NOEL MALOD-DOGNIN
USING KENDALL-R META-BAGGING TO IMPROVE PROTEIN-PROTEIN DOCKING
PREDICTIONS 284
JEROME AZE, THOMAS BOURQUARD, SYLVIE HAMEL, ANNE POUPON, AND DAVID W.
RITCHIE
PAAA: A PROGRESSIVE ITERATIVE ALIGNMENT ALGORITHM BASED ON ANCHORS 296
AHMED MOKADDEM AND MOURAD ELLOUMI
SESSION 9: IMAGE ANALYSIS (2)
HEAT DIFFUSION BASED DISSIMILARITY ANALYSIS FOR SCHIZOPHRENIA
CLASSIFICATION 306
AY DM ULAS, UMBERTO CASTELLANI, VITTORIO MURINO, MARCELLA BELLANI,
MICHELE TANSELLA, AND PAOLO BRAMBILLA
IMAGE 4
XII TABLE OF CONTENTS
EPITHELIAL AREA DETECTION IN CYTOKERATIN MICROSCOPIC IMAGES USING MSER
SEGMENTATION IN AN ANISOTROPIE PYRAMID 318
CRISTIAN SMOCHINA, RADU ROGOJANU, VASILE MANTA, AND WALTER KROPATSCH
PATTERN RECOGNITION IN HIGH-CONTENT CYTOMICS SCREENS FOR TARGET
DISCOVERY - CASE STUDIES IN ENDOCYTOSIS 330
LU CAO, KUAN YAN, LEAH WINKEL, MARJO DE GRAAUW, AND FONS J. VERBEEK
AUTHOR INDEX 343
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| spellingShingle | Pattern recognition in bioinformatics 6th IAPR international conference, PRIB 2011 ; Delft, The Netherlands, November 2 - 4, 2011 ; proceedings Lecture notes in computer science Mustererkennung (DE-588)4040936-3 gnd Bioinformatik (DE-588)4611085-9 gnd |
| subject_GND | (DE-588)4040936-3 (DE-588)4611085-9 (DE-588)1071861417 |
| title | Pattern recognition in bioinformatics 6th IAPR international conference, PRIB 2011 ; Delft, The Netherlands, November 2 - 4, 2011 ; proceedings |
| title_auth | Pattern recognition in bioinformatics 6th IAPR international conference, PRIB 2011 ; Delft, The Netherlands, November 2 - 4, 2011 ; proceedings |
| title_exact_search | Pattern recognition in bioinformatics 6th IAPR international conference, PRIB 2011 ; Delft, The Netherlands, November 2 - 4, 2011 ; proceedings |
| title_full | Pattern recognition in bioinformatics 6th IAPR international conference, PRIB 2011 ; Delft, The Netherlands, November 2 - 4, 2011 ; proceedings Marco Loog ... (eds.) |
| title_fullStr | Pattern recognition in bioinformatics 6th IAPR international conference, PRIB 2011 ; Delft, The Netherlands, November 2 - 4, 2011 ; proceedings Marco Loog ... (eds.) |
| title_full_unstemmed | Pattern recognition in bioinformatics 6th IAPR international conference, PRIB 2011 ; Delft, The Netherlands, November 2 - 4, 2011 ; proceedings Marco Loog ... (eds.) |
| title_short | Pattern recognition in bioinformatics |
| title_sort | pattern recognition in bioinformatics 6th iapr international conference prib 2011 delft the netherlands november 2 4 2011 proceedings |
| title_sub | 6th IAPR international conference, PRIB 2011 ; Delft, The Netherlands, November 2 - 4, 2011 ; proceedings |
| topic | Mustererkennung (DE-588)4040936-3 gnd Bioinformatik (DE-588)4611085-9 gnd |
| topic_facet | Mustererkennung Bioinformatik Konferenzschrift 2011 Delft |
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| volume_link | (DE-604)BV000000607 |
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