Molecular interactions of actin Actin structure and actin-binding proteins

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Veröffentlicht: Berlin [u.a.] Springer 2001
Schriftenreihe:Results and problems in cell differentiation 32
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Datensatz im Suchindex

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adam_text Contents An Overview of Actin Structure and Actin-Binding Proteins Cristobal G. dos Remedios and Dave D. Thomas The Origins of this Book 1 A Historical Perspective of Actin Assembly and Its Interactions .... 1 Divalent Cations, Nucleotides and Actin Structure 2 Helical Parameters of F-Actin Precisely Determined from X-Ray Fiber Diffraction of Well-Oriented Sols 2 Analysis of Models of F-Actin Using Fluorescence Resonance Energy Transfer Spectroscopy 3 Microscopic Analysis of Polymerization and Fragmentation of Individual Actin Filaments 3 Two Conformations of G-Actin Related to Two Conformations of F-Actin 3 Actin Structure Function Relationships Revealed by Yeast Molecular Genetics 4 Actin-Binding Proteins: an Overview 4 The ADF/Cofilin Family: Accelerators of Actin Reorganization .... 4 Predicting Interaction Sites Between Glycolytic Enzymes and Cytoskeletal Proteins Employing the Concepts of the Molecular Recognition Theory 5 Regulation of the Cytoskeleton Assembly: a Role for a Ternary Complex of Actin with Two Actin-Binding Proteins 5 Structure of Gelsolin 6 Actin Filament Networks 6 ARPS: Actin-Related Proteins 6 Extracellular Signals and the Cytoskeleton 7 References 7 A Historical Perspective of Actin Assembly and Its Interactions Fumio Oosawa Introducton 9 The G-F Transformation 10 F-Actin Structure and Bond Free Energy 11 Dynamics of F-Actin 12 Activation of F-Actin or Thin Filaments 14 VI Contents Sliding of F-Actin on Myosin 14 Pathway of Free Energy Conversion 15 The State of F-Actin During Sliding 16 Actin in Non-Muscle Cells 18 Future of Actin Research 18 References 19 Divalent Cations, Nucleotides, and Actin Structure Hanna Strzelecka-Goraszewska Introduction 23 Effects of Cations on the State and Properties of Actin 24 Tightly Bound Cation-Dependent Conformational Changes in G-Actin 27 Effects of Polymerizing Salts on G-Actin Conformation: Monomer Activation 32 Cation-Dependent Differences in F-Actin Structure 34 Conclusions 36 References 37 The Helical Parameters of F-Actin Precisely Determined from X-Ray Fiber Diffraction of Well-Oriented Sols Toshiro Oda, Kouji Makino, Ichiro Yamashita, Keiichi Namba, and Yuichiro Mae da Structural Analysis of F-Actin 43 Procedures for Recording and Analyzing X-Ray Fiber Diffraction Patterns from Well-Oriented F-Actin Sols 44 Sample Preparation 44 X-Ray Diffraction 45 Analysis of X-Ray Fiber Diffraction Patterns 45 How to Make Well-Oriented F-Actin Filament Sols 48 Specimens Suitable for X-Ray Fiber Diffraction 48 Effect of the Filament Length 48 Effect of Salt Concentration and pH 49 Effect of Various Kinds of Anions and Cations 49 Practical Procedures - Centrifugation and Magnetic Field 50 Strategy 51 X-Ray Fiber Diffraction Pattern 51 Small-Angle Region (up to the Resolution of 8 A) of the X-Ray Diagram 52 High-Angle Region (from 8 to 3.4 A) of the Diffraction Pattern 53 Structural Information Obtained from X-Ray Fiber Diffraction Patterns 53 Helical Structure of F-Actin Filament 53 Pitch of the One-Start Helix 53 Contents VII Helical Symmetry 54 Extraction of Layer-Line Intensities 54 Relation Between F-Actin Filament Disorienation and the Quality of Diffraction Patterns 55 Conclusions 56 References 56 Analysis of Models of F-Actin Using Fluorescence Resonance Energy Transfer Spectroscopy Pierre D. J. Moens and Cristobal G. dos Remedios Introduction 59 Protein Preparation 61 Labeling of Cys-374 61 Labeling of the Nucleotide-Binding Site of Unlabeled and DDPM-Labeled Actin 61 Experimental Design 61 Actin Polymerization and Determination of the Angle-Rintra 61 Actin Polymerization for Rintra-Angle Determination 62 Actin Concentration After Dowex-1 62 Fluorescence Measurements 63 Theoretical Calculations 63 Determination of Cys-374 Radial Coordinate 64 Determination of the Angle-Rintra 64 Determination of the Rintra-Angle 66 Localization of the Probe Bound to Cys-374 68 The Orientation Factor k2 in F-Actin 68 Nucleotide Radial Coordinate 72 Localization of the Probe in the F-Actin Models 73 Do these Results Exclude Any Other Orientation of the Monomer? 74 Conclusions 75 References 76 Microscopic Analysis of Polymerization and Fragmentation of Individual Actin Filaments Shin ichi Ishiwata, Junko Tadashige, Ichiro Masui, Takayuki Nishizaka, and Kazuhiko Kinosita, Jr Introduction 79 How to Image the Polymerization (and Fragmentation) Process of Actin Filaments 81 Visualization of the Polymerization Process of Actin Filaments 82 Measurement of the Polymerization Process of Actin Filaments ... 84 Relation Between Polymerization Rate and Actin Concentration 85 Fragmentation of Actin Filaments: Effect of Anions at High Ionic Strength 88 VIII Contents Conclusions 91 References 91 Two Conformations of G-Actin Related to Two Conformations of F-Actin Edward H. Egelman and Albina Orlova Multiple Conformations of F-Actin 95 Different Structural States of G-Actin 95 A Yeast Actin Mutant with an Open Nudeotide Conformation 98 Wild-Type Actin Has a Closed Nudeotide Cleft 98 Differences in F-Actin Reconstruction Are Highly Significant 98 Summary 100 References 100 Actin Structure Function Relationships Revealed by Yeast Molecular Genetics Lisa D. Belmont and David G. Drubin Introduction 103 Probing Actin Structural Changes and Mechanism of Polymerization and Depolymerization 103 Probing the Nucleotide-Binding Cleft 108 Testing the Hydrophobic Plug Model 109 Introduction of Chemical Probes at Unique Sites 110 Identification of Binding Sites of Proteins and Drugs Ill Mapping the Binding Sites of Actin Binding Proteins on the Surface of Actin 112 Mapping the Binding Sites of Drugs on the Surface of Actin 114 Actin Mutants Reveal in Vivo roles of Actin 116 Concluding Remarks 117 References 119 Actin-Binding Proteins: An Overview Enrique M. De La Cruz Types of Actin Structures 123 Classification of ABPs 123 The Big Picture and How the Details Define it 126 Components 127 Interactions 127 Regulation and Dynamics 129 Structure 130 Cells and Organisms 131 References 133 Contents IX The ADF/Cofilin Family: Accelerators of Actin Reorganization Amy McGough, Brian Pope, and Alan Weeds Introduction 135 ADF/Cofilin: Distribution in Organisms and Tissues 135 Sequence Analysis 138 Atomic Models of ADF, Cofilin and Actophorin 138 Cofilin/Actin Interactions 141 The Binding Site for Actin on Cofilin 141 The Binding Site for Cofilin on Actin 142 Effect of Cofilin on Actin Structure 144 Effects of ADF/Cofilin on Actin Dynamics in Vitro 146 Regulation of Cofilin Activity 147 Effect of Cofilin on Actin Turnover in Cells 149 Future Directions 150 References 151 Predicting Interaction Sites between Glycolytic Enzymes and Cytoskeletal Proteins Employing the Concepts of the Molecular Recognition Theory R. J. Sheedy and F. M. Clarke Introduction 155 Molecular Recognition Theory and the Interaction of Actin and Gelsolin Segment 1 156 Identification of a Potential Actin/GAPDH Interaction Site 158 Analysis of Potential Actin-Binding Site on GAPDH 161 Conclusions 163 References 163 Regulation of the Cytoskeleton Assembly: a Role for a Ternary Complex of Actin with Two Actin-Binding Proteins Murat Kekic, Neil J. Nosworthy, Irina Dedova, Charles A. Collyer, and Cristobal G. dos Remedios Introduction 165 The Role and Distribution of Actin-Binding Proteins 165 Atomic Structure of Actin 166 Atomic Structure of Actin and Actin-Binding Proteins 166 Where Does Cofilin Bind to Actin? 166 Where Does DNase I Bind to Actin? 167 Ternary Complexes of DNase I and Actin 168 Other Pointed-End-Binding Proteins 169 What Do We Know About Ternary Complexes of Actin, Cofilin and Other ABPs? 169 Preparation of Actin and Cofilin 170 X Contents Native Gel Electrophoresis 171 Titration of Cofilin into the Binary Actin-DNase I Complex 171 Titration of Increasing DNase I into the 1:1 Actin-Cofilin Complex... 172 Identification of the Proteins in the Ternary Complex 173 Positive Cooperativity in Ternary Complexes 174 Negative Cooperativity Between Thymosin p4 and Actin 174 Evidence for a Conformational Change in G-Actin 175 Conclusions 177 References 177 Actin Filament Networks Paul A. Janmey, Jagesh V. Shah, Jay X. Tang, and Thomas P. Stossel Introduction 181 Viscoelastic Characterization of Actin Networks 183 Viscosity of F-Actin 183 Elasticity of F-Actin 184 Actin-Binding Proteins that Alter Network Formation 185 Cross Linking Proteins 185 Actin Severing and Capping Proteins 187 Comparison with Theories for Semiflexible Polymers 189 Interaction with Other Polymers 191 Actin and Microtubules 192 Actin and Intermediate Filaments 192 Actin and Noncytoplasmic Biopolymers 193 Roles for Network Formation Independent of Mechanical Strength 193 Actin Networks in Vivo 194 Conclusions 194 References 195 Structure and Function of Gelsolin Leslie D. Burtnick, Robert C. Robinson and Senyon Choe The Biochemical Actions of Gelsolin 201 The Structure of Gelsolin 202 Interactions with Actin 206 Conclusions 209 References 209 Arps: Actin-Related Proteins Laura M. Machesky and Robin C. May Introduction 213 Arpl: the Dynactin Complex 213 Structure of the Dynactin Complex 215 Contents XI Vesicle Trafficking 218 Nuclear Migration 219 Spindle Assembly and Orientation 219 Arp2 and Arp3: the Arp2/3 Complex 221 Structure of the Arp2/3 Complex 221 Actin Nucleation and Cross-linking 222 Endocytosis and Cortical Actin Organization 223 Arp4 andArp7/9 225 The SWI/SNF Complex 225 Other Arps 226 Why Does the Cell Have Arps? 226 References 227 Control of the Actin Cytoskeleton by Extracellular Signals Thomas Beck, Pierre-Alain Delley, and Michael N. Hall Introduction 231 Saccharomyces Cerevisiae 232 Pheromone-Induced Actin Reorganization 233 CDC42 Effectors Involved in Actin Polarization 234 STE20 234 GICs 236 BNI1 236 Filamentous Growth 236 Growth De- and Re-Polarization in Response to Environmental Stress 237 Drosophila Melanogaster 238 Dorsal Closure 238 Function of the JNK Pathway in Dorsal Closure 239 Function of the TGF-P Pathway in Dorsal Closure 240 Upstream of Cdc42, Rac and Rho 241 Gastrulation 241 Mammalian Cells 242 Control of Actin Organization by Rho-type GTPases 242 Activation of Rho-Type GTPases by Extracellular Signals 244 Effectors of Cdc42, Racl and Rho A Involved in Actin Organization 245 WASP and N-WASP 245 PAK and PIX 246 MRCK 247 IQGAP 247 PI 5-Kinase 247 Rho Kinases 248 PRKs 248 Formins 249 XII Contents ... and more 249 Crosstalk: Signalling Between Rho GTPases 249 Cell Migration 250 Subversion of Host Cell Actin Cytoskeleton by Extracellularly-Bound Bacterial Pathogens 251 References 254 Subject Index 263
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series Results and problems in cell differentiation
series2 Results and problems in cell differentiation
Results and problems in cell differentation
spellingShingle Molecular interactions of actin
Results and problems in cell differentiation
Actin (DE-588)4201876-6 gnd
Strukturchemie (DE-588)4183790-3 gnd
Actin-bindende Proteine (DE-588)4359634-4 gnd
Molekularbiologie (DE-588)4039983-7 gnd
subject_GND (DE-588)4201876-6
(DE-588)4183790-3
(DE-588)4359634-4
(DE-588)4039983-7
(DE-588)4143413-4
title Molecular interactions of actin
title_auth Molecular interactions of actin
title_exact_search Molecular interactions of actin
title_full Molecular interactions of actin Actin structure and actin-binding proteins [Fourth Pentennial Actin Conference held at the new Sheraton Maui in Hawai in 1998]
title_fullStr Molecular interactions of actin Actin structure and actin-binding proteins [Fourth Pentennial Actin Conference held at the new Sheraton Maui in Hawai in 1998]
title_full_unstemmed Molecular interactions of actin Actin structure and actin-binding proteins [Fourth Pentennial Actin Conference held at the new Sheraton Maui in Hawai in 1998]
title_short Molecular interactions of actin
title_sort molecular interactions of actin actin structure and actin binding proteins
topic Actin (DE-588)4201876-6 gnd
Strukturchemie (DE-588)4183790-3 gnd
Actin-bindende Proteine (DE-588)4359634-4 gnd
Molekularbiologie (DE-588)4039983-7 gnd
topic_facet Actin
Strukturchemie
Actin-bindende Proteine
Molekularbiologie
Aufsatzsammlung
url http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=019277115&sequence=000002&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA
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(DE-604)BV000022913
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