Intestinal microorganisms of termites and other invertebrates
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Format: | Buch |
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Sprache: | English |
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Berlin [u.a.]
Springer
2006
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Schriftenreihe: | Soil biology
6 |
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245 | 1 | 0 | |a Intestinal microorganisms of termites and other invertebrates |c Helmut König ... (eds.) |
264 | 1 | |a Berlin [u.a.] |b Springer |c 2006 | |
300 | |a XXIII, 483 S. |b Ill., graph. Darst. |c 24 cm | ||
336 | |b txt |2 rdacontent | ||
337 | |b n |2 rdamedia | ||
338 | |b nc |2 rdacarrier | ||
490 | 1 | |a Soil biology |v 6 | |
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700 | 1 | |a König, Helmut |e Sonstige |4 oth | |
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adam_text | into the intestinal microbiota of
ected towards graduate students
il interest in the soil or intestinal
in general.
iding their expertises and contri-
sible. We also express our thanks
mventional and less investigated,
blication in this prestigious book,
eschlik and Dr. Jutta Lindenborn
o managed this special book.
Helmut König and Ajit Varma
Part I Soil Invertebrates
1 Biology of Soil Invertebrates 3
Gerhard Eisenbeis
1.1 Introduction.............................................. 3
1.2 The Microfauna............................................ 8
1.2.1 Protozoa........................................... 8
1.2.2 Nematoda - Roundworms, Eelworms................... 10
1.3 TheMesofauna............................................. 12
1.3.1 Pseudoscorpionida - False Scorpions, Book Scorpions 13
1.3.2 Acari - Mites..................................... 14
1.3.3 Symphyla.......................................... 17
1.3.4 Pauropoda......................................... 19
1.3.5 Collembola - Springtails.......................... 19
1.3.6 Protura........................................... 23
1.3.7 Diplura - Double Tails............................ 25
1.4 The Macrofauna........................................... 26
1.4.1 Araneida - Spiders................................ 27
1.4.2 Opiliones - Harvestmen............................ 29
1.4.3 Terrestrial Isopoda (Oniscoidea) - Woodlice....... 30
1.4.4 Chilopoda ֊ Centipedes............................ 33
1.4.5 Diplopoda - Millipedes............................ 35
1.4.6 Enchytraeidae - Whiteworms, Potworms.............. 37
1.4.7 Oligochaeta: Lumbricidae - Earthworms............. 39
1.4.8 Terrestrial Gastropoda - Slugs and Snails......... 41
1.4.9 Insecta - Pterygote Insects (Short Comments About
the Role of Selected Groups of Higher Insects).... 42
1.5 Conclusions.............................................. 43
References.................................................... 47
2 Interactions Between Bacteria and Nematodes 55
Leo Eberl, David ). Clarke
2.1 Introduction............................................. 55
X Contents
2.2 Pathogenic Interactions.................................. 55
2.3 Symbiotic Interactions................................... 57
2.3.1 Photorhabdus and Xenorhabdus....................... 57
2.4 Conclusions.............................................. 62
References..................................................... 62
3 Earthworm Gut Microbial Biomes: Their Importance
to Soil Microorganisms, Denitrification, and the Terrestrial
Pro duction of the Greenhouse Gas N2 O 65
Harold L. Drake, Andreas Schramm, Marcus A. Horn
3.1 Introduction............................................. 65
3.2 The Earthworm Gut as a Transient Microbial Habitat....... 65
3.3 In Vivo and In Situ Emissions of the Greenhouse Gas N20
by Earthworms............................................ 66
3.4 Microenvironment of the Earthworm Gut.................... 69
3.4.1 The Digestive System of the Earthworm.............. 69
3.4.2 Physicochemical Parameters of the Gut that Stimulate
Ingested Microbes.................................. 70
3.5 Microbial Processes in the Earthworm Gut................. 72
3.5.1 Processes Associated with the Production of N2O... 72
3.5.2 Fermentative and Other Microbial Processes......... 75
3.6 Microbial Populations in the Earthworm Gut............... 76
3.6.1 Quantitative Population Changes During Gut Passage. 77
3.6.2 Qualitative Population Changes Upon Gut Passage... 78
3.6.3 The Quest for an Earthworm-Specific Microbial
Population......................................... 79
3.7 Conclusions.............................................. 80
References..................................................... 82
4 Intestinal Microbiota of Millipedes 89
Boris A. Byzov
4.1 Introduction............................................. 89
4.2 Structure and Function of the Digestive Tract............ 90
4.3 Physiological Conditions in the Gut...................... 92
4.4 Microscope Studies of Intestinal Microbiota.............. 93
4.4.1 Bacteria........................................... 93
4.4.2 Yeasts............................................. 95
4.4.3 Mycelial Fungi..................................... 95
4.5 Taxonomic Studies of Intestinal Microbiota............... 95
4.5.1 Bacteria.......................................... 101
4.5.2 Fungi............................................. 103
4.6 Functions of the Intestinal Microbiota.................. 104
Contents XI
4.6.1 Digestive Functions of Gut Microorganisms......... 104
4.6.2 Intestinal Microbiota as a Food for Millipedes....107
4.6.3 Resistance to Colonization.........................107
4.6.4 Intestinal Microbiota as a Pathogenic Agent........108
4.7 Digestion of Microorganisms by Millipedes................109
4.7.1 Killing Activity of the Midgut Fluid.............. 109
4.7.2 Killing Effect.....................................109
4.7.3 Properties of the Killing Compound(s)..............110
4.7.4 Induced Autolysis..................................110
4.7.5 Assimilation of Microorganisms.....................110
4.8 Conclusions..............................................Ill
References....................................................112
5 Intestinal Microbiota of Terrestrial Isopods 115
Rok Kostanjšek, Jasna Štrus, Aleš Lapanje, Gorazd Avguštin,
Maja Rupnik, Damjana Drobne
5.1 Introduction............................................ 115
5.2 Structure and Function of the Digestive System...........116
5.3 The Microbiota of the Digestive System...................119
5.3.1 Bacteria in the Gut................................119
5.3.2 Fungi and Protozoa in the Gut......................122
5.3.3 Bacteria in the Midgut Glands......................123
5.3.4 Infections of the Digestive System.................124
5.4 Conclusions..............................................125
References.................................................... 126
6 Collembola as a Habitat for Microorganisms 133
Christoph C. Tebbe, Alice B. Czarnetzki, Torsten Thimm
6.1 Introduction - Diversity and Activity of Collembola..... 133
6.2 The Gut of Folsomia Candida - an Unusual Microbial Habitat
That Is Affected by Moulting............................ 136
6.3 Feeding Preferences of Folsomia Candida
and Fate of Ingested Bacterial Cells.................... 139
6.4 The Gut of Collembola: a Hot Spot
for Conjugative Gene Transfer Between Bacteria.......... 141
6.5 Diversity of Microorganisms in the Gut
of F. Candida and Other Collembola.......................144
6.6 Collembola Can Harbour the Reproduction Parasite
Wolbachia and Other Intracellular Bacteria...............146
6.7 Conclusions............................................. 149
References.....................................................150
XII
Contents
7 Methane Production by Terrestrial Arthropods 155
Johannes H. P. Hackstein, Theo A. van Alen, Jorg Rosenberg
7.1 Introduction.............................................155
7.2 Symbiotic Methanogens and Terrestrial Arthropods.........156
7.3 Why Do Certain Arthropods Make Methane and Others Not? 159
7.4 “Small Is Beautiful”: The Elusive Co-Existence of Aerobes
and Anaerobes in Arthropod Guts.........................167
7.5 Longitudinal Differentiation of the Intestinal Tract
of Methanogenic Arthropods..............................172
7.6 Intercompartment Hydrogen Transfer.......................172
7.7 Differentiations of the Intestinal Tract to Host Methanogenic
Archaea (and Other Prokaryotes).........................173
7.8 Biodiversity of Intestinal and Endosymbiotic Methanogens .. 175
7.9 Conclusions..............................................176
References................................................... 177
Part II Termites as Model Organisms
8 Termites as Soil Engineers and Soil Processors 183
David E. Bignell
8.1 Introduction.............................................183
8.2 Current State of Termite Science........................ 185
8.3 Termite Biology and Evolution........................... 190
8.4 Soil Ecosystem Engineers: Is This a Valid Concept?.......193
8.5 Microbial Processing During Gut Transit...........198
8.6 The Special Case of Fungus-Growing Termites..............201
8.7 The Fate of Termite Faeces...............................203
8.8 Evidence of the Role of Termites in Pedogenesis
and Soil Properties......................................205
8.8.1 Soil Profile Development...........................206
8.8.2 Bulk Density and Structural Stability
of Mound Materials.................................207
8.8.3 Permeability to Water..............................208
8.8.4 Soil Chemistry.....................................209
8.8.5 Organic Matter Decomposition.......................209
8.9 Conclusions..............................................210
References....................................................212
9 Cellulose Digestion in the Termite Gut 221
Li Li, Jürgen Fröhlich, Helmut König
9.1 Introduction.............................................221
Contents
XIII
9.2 Termite’s Cellulases.....................................223
9.3 Microbial Cellulases in the Hindgut.......................225
9.4 Cellulose Digestion in the Termite
Mastotermes darwiniensis..................................228
9.4.1 Termites’ and Flagellates’ Cellulases...............228
9.4.2 Comparison of Termite’s Cellulases....,............229
9.4.3 Comparison of Archaezoan Cellulases.................235
9.5 Conclusions...............................................236
References......................................................238
10 Symbiotic Protozoa of Termites 243
Guy Brugerolle, Renate Radek
10.1 Introduction..............................................243
10.2 Diversity, Cytology and Phylogeny of Symbiotic Protozoa
in Lower Termites.........................................243
10.2.1 Cell Organisation in Oxymonad and Parabasalid
Termite Flagellates.................................244
10.3 Biology of Termite Flagellates............................253
10.3.1 Relationships Between Flagellates and Host.........253
10.3.2 Populations of Flagellates.........................256
10.3.3 Nutrition..........................................257
10.3.4 Energy Metabolism/Hydrogenosomes...................259
10.3.5 Motility...........................................260
10.3.6 Associations with Bacteria.........................262
10.4 Conclusion................................................264
References......................................................264
11 Diversity and Lignocellulolytic Activities
of Cultured Microorganisms 271
Helmut König, Jürgen Fröhlich, Horst Hertel
11.1 Introduction..............................................271
11.2 Flagellates...............................................272
11.3 Bacteria..................................................272
11.4 Archaea...................................................273
11.5 Yeasts and Fungi..........................................273
11.6 Microhabitats.............................................281
11.7 Lignocellulose Degradation................................284
11.7.1 The Hydrolytic Stage of Lignocellulose Degradation... 284
11.7.2 The Oxidative/Fermentative Stage
of Lignocellulose Degradation.......................290
11.7.3 The Methanogenic/Acetogenic Stage
of the Lignocellulose Degradation...................290
XIV
Contents
11.8 Nitrogen Fixing Bacteria.................................292
11.9 Intracellular Symbiosis..................................293
11.10 Conclusions.............................................293
References.....................................................294
12 Diversity and Molecular Analyses
of Yet-Uncultivated Microorganisms 303
Moriya Ohkuma, Yuichi Hongoh, Toshiaki Kudo
12.1 Introduction.............................................303
12.2 Phylogenetic Identification of Symbiotic Protists........304
12.3 Methanogenic Archaea.....................................305
12.4 Diversity of Eubacteria..................................305
12.5 Spatial Organization of Gut Community....................309
12.6 Toward the Function of Gut Symbionts.....................311
12.7 Conclusions..............................................313
References.....................................................314
13 The Intestinal Yeasts 319
Hansjörg Prillittger, Helmut König
13.1 Introduction.............................................319
13.2 Morphological Characterization...........................319
13.3 Phenotypic and Genotypic Characterization................322
13.4 Cellulose and Hemicellulose-Degrading Yeasts.............323
13.5 Evolutionary Considerations..............................326
13.6 Conclusions..............................................330
References.....................................................331
14 Termitomyces/Termite Interactions 335
Corinne Rouland-Lejevre, Tetsushi lnoue, Toru ]ohjima
14.1 Introduction.............................................335
14.2 Phylogeny and Co-Evolution of Fungus-Growing Termites
and Termitomyces..........................................336
14.2.1 The Symbionts......................................336
14.2.2 Evolution of Fungus-Growing Termites
and Termitomyces....................................337
14.3 The Role of Termitomyces in Mutualistic Symbiosis........338
14.3.1 Nature, Structure and Dynamics of the Fungus Comb. 338
14.3.2 Role of Termitomyces in the Digestive Metabolism
of Termites.........................................340
14.4 Conclusions..............................................347
References.....................................................347
Contents XV
15 Microbiology of Termite Hill (Mound) and Soil 351
Rina Kumari, Minu Sachdev, Shweta Sharma, Ram Prasad,
Pham Huong Giang, Amar P. Garg, Ajit Varma
15.1 Introduction.............................................351
15.2 Features Distinguishing Termites from Other Insects......352
15.3 Current Taxonomic Status................... ............352
15.4 Ecophysiological Distribution............................354
15.5 Termite Colonies and Castes..............................354
15.6 Life Cycle...............................................358
15.7 Topography of the Termite Hill (Mound) and Nest..........358
15.8 Microorganism from the Termite Soil......................359
15.9 Soil-Feeding Termites....................................363
15.10 Fungus-Growing Termites.................................364
15.11 Chemical Nature of Lignocellulose.......................365
15.11.1Cellulose.........................................365
15.11.2Hemicellulose.....................................366
15.11.3 Lignin...........................................367
15.12 Biodegradation of Biomass...............................368
15.13 Conclusions.............................................369
References....................................................369
16 The Termite Gut Habitat: Its Evolution and Co-Evolution 373
Paul Eggleton
16.1 Introduction.............................................373
16.2 Background: Some Definitions.............................373
16.2.1 Termite Biology...................................373
16.2.2 Which Environments?...............................374
16.2.3 Community Ecology Definitions.....................375
16.3 Biodiversity of Termite Guts.............................377
16.4 The Termite Gut Habitat and its Evolution................382
16.5 Acquisition of Symbionts in Basal Dicytopterans..........384
16.6 Evolution of Key Enzyme Systems: Endoglucanases
and Nitrogenases.........................................386
16.7 Blattabacterium..........................................387
16.8 Parabasalids.............................................388
16.9 Termitomyces.............................................392
16.10 Spirochetes.............................................393
16.11 Clostridiales...........................................394
16.12 Archaea.................................................395
16.13 Conclusions.............................................398
References....................................................400
XVI Contents
Part III Modern Methods for Studying Intestinal Methods
17 The Microbial Soil Flora: Novel Approaches for Accessing
the Phylogenetic and Physiological Diversity of Prokaryotes 407
Alexander H. Treusch, Christa Schleper
17.1 Introduction............................................407
17.2 The Modern Classical Approach...........................408
17.3 How Many Prokaryotic Species Live in Soil?..............409
17.4 Molecular Approaches to Describe Microbial Diversity....411
17.5 The Current Picture of Prokaryotic Diversity in Soil....413
17.6 Studying Physiological Diversity........................415
17.7 Environmental Genomic Studies...........................417
17.8 Conclusions.............................................419
References....................................................420
18 Micromanipulation Techniques for the Isolation
of Single Microorganisms 425
Jürgen Fröhlich, Helmut König
18.1 Introduction............................................425
18.2 Micromanipulation Techniques............................426
18.2.1 Historical Perspective...........................426
18.2.2 Modern Equipment.................................427
18.3 Isolation Techniques....................................429
18.3.1 Bactotip Method..................................429
18.3.2 Membrane Method..................................431
18.3.3 Efficiency of the Cloning Procedure..............431
18.3.4 Described Applications...........................432
18.4 Laser Micromanipulation Systems.........................433
18.4.1 Optical Tweezers.................................433
18.4.2 Laser Microdissection............................434
18.5 Conclusions.............................................434
References....................................................435
19 Localization and Visualization of Microbial Community
Structure and Activity in Soil Microhabitats 439
Michael Schmid, Draženka Seiest, Michael Rothballer,
Michael Schloter, Natuschka Lee, Ellen Kandeler, Anton Hartmann
19.1 Introduction............................................439
19.2 Localization and Microvisualization Approaches..........440
19.3 In Situ Composition Analysis of Bacterial Communities..442
19.3.1 The Fluorescence in Situ Hybridization
(FISH) Technique..................................442
Contents
XVII
19.3.2 Recent Developments Towards Improved
FISH Techniques...................................444
19.3.3 Immunological Techniques.........................448
19.4 In Situ Activity of Microbial Communities..............449
19.4.1 In Situ Assessment of General and Specific Enzymatic
Activities of Cells............................. 449
19.4.2 Isotope Tracer Techniques........................450
19.4.3 Specific Fluorescence Labelling/Tagging Techniques... 454
19.5 Conclusions............................................455
References...................................................455
20 Microsensors for the Study of Microenvironments
and Processes in the Intestine of Invertebrates 463
Andreas Schramm
20.1 Introduction...........................................463
20.2 Microsensors Available.................................463
20.3 Microsensors in the Study of Invertebrate Guts.........466
20.4 Practical Considerations...............................468
20.4.1 Construction and Purchase of Sensors and Equipment 468
20.4.2 Fixation of Animals, Gut Preparation
and Measuring Conditions..........................468
20.5 Conclusions............................................470
References...................................................471
Subject Index
475
|
any_adam_object | 1 |
building | Verbundindex |
bvnumber | BV023829904 |
classification_rvk | WI 5100 |
ctrlnum | (OCoLC)181471529 (DE-599)BVBBV023829904 |
dewey-full | 570 |
dewey-hundreds | 500 - Natural sciences and mathematics |
dewey-ones | 570 - Biology |
dewey-raw | 570 |
dewey-search | 570 |
dewey-sort | 3570 |
dewey-tens | 570 - Biology |
discipline | Biologie |
format | Book |
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genre | (DE-588)4143413-4 Aufsatzsammlung gnd-content |
genre_facet | Aufsatzsammlung |
id | DE-604.BV023829904 |
illustrated | Illustrated |
indexdate | 2024-07-09T21:37:36Z |
institution | BVB |
isbn | 3540281800 |
language | English |
oai_aleph_id | oai:aleph.bib-bvb.de:BVB01-017472074 |
oclc_num | 181471529 |
open_access_boolean | |
owner | DE-634 DE-188 |
owner_facet | DE-634 DE-188 |
physical | XXIII, 483 S. Ill., graph. Darst. 24 cm |
publishDate | 2006 |
publishDateSearch | 2006 |
publishDateSort | 2006 |
publisher | Springer |
record_format | marc |
series | Soil biology |
series2 | Soil biology |
spelling | Intestinal microorganisms of termites and other invertebrates Helmut König ... (eds.) Berlin [u.a.] Springer 2006 XXIII, 483 S. Ill., graph. Darst. 24 cm txt rdacontent n rdamedia nc rdacarrier Soil biology 6 Bodentiere (DE-588)4007414-6 gnd rswk-swf Darmflora (DE-588)4148805-2 gnd rswk-swf Wirbellose (DE-588)4066359-0 gnd rswk-swf Mikroorganismus (DE-588)4039226-0 gnd rswk-swf Termiten (DE-588)4059505-5 gnd rswk-swf (DE-588)4143413-4 Aufsatzsammlung gnd-content Bodentiere (DE-588)4007414-6 s Wirbellose (DE-588)4066359-0 s Darmflora (DE-588)4148805-2 s Mikroorganismus (DE-588)4039226-0 s DE-188 Termiten (DE-588)4059505-5 s König, Helmut Sonstige oth Soil biology 6 (DE-604)BV019353150 6 KOBV Fremddatenuebernahme application/pdf http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=017472074&sequence=000001&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA Inhaltsverzeichnis |
spellingShingle | Intestinal microorganisms of termites and other invertebrates Soil biology Bodentiere (DE-588)4007414-6 gnd Darmflora (DE-588)4148805-2 gnd Wirbellose (DE-588)4066359-0 gnd Mikroorganismus (DE-588)4039226-0 gnd Termiten (DE-588)4059505-5 gnd |
subject_GND | (DE-588)4007414-6 (DE-588)4148805-2 (DE-588)4066359-0 (DE-588)4039226-0 (DE-588)4059505-5 (DE-588)4143413-4 |
title | Intestinal microorganisms of termites and other invertebrates |
title_auth | Intestinal microorganisms of termites and other invertebrates |
title_exact_search | Intestinal microorganisms of termites and other invertebrates |
title_full | Intestinal microorganisms of termites and other invertebrates Helmut König ... (eds.) |
title_fullStr | Intestinal microorganisms of termites and other invertebrates Helmut König ... (eds.) |
title_full_unstemmed | Intestinal microorganisms of termites and other invertebrates Helmut König ... (eds.) |
title_short | Intestinal microorganisms of termites and other invertebrates |
title_sort | intestinal microorganisms of termites and other invertebrates |
topic | Bodentiere (DE-588)4007414-6 gnd Darmflora (DE-588)4148805-2 gnd Wirbellose (DE-588)4066359-0 gnd Mikroorganismus (DE-588)4039226-0 gnd Termiten (DE-588)4059505-5 gnd |
topic_facet | Bodentiere Darmflora Wirbellose Mikroorganismus Termiten Aufsatzsammlung |
url | http://bvbr.bib-bvb.de:8991/F?func=service&doc_library=BVB01&local_base=BVB01&doc_number=017472074&sequence=000001&line_number=0001&func_code=DB_RECORDS&service_type=MEDIA |
volume_link | (DE-604)BV019353150 |
work_keys_str_mv | AT konighelmut intestinalmicroorganismsoftermitesandotherinvertebrates |