Reactive transport in porous media

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Veröffentlicht: Washington, DC Mineralogical Soc. of America 1996
Schriftenreihe:Reviews in mineralogy 34
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adam_text REACTIVE TRANSPORT IN POROUS MEDIA TABLE OF CONTENTS, RlM VOLUME 34 Page Foreword........................................................................................... iii Preface.............................................................................................. iii Chapter 1 P. C. Lichtner Continuum formulation of multicomponent-multiphase reactive Transport Introduction........................................................................................ 1 Continuum Hypothesis.......................................................................... 2 Darcy sLaw.............................................................................. 4 General Conservation Law..................................................................... 5 Conservation of mass.................................................................. 7 Partially saturated porous medium............................................ 8 Solids............................................................................. 8 Conservation of energy................................................................ 9 Chemical Reactions............................................................................... 10 The law of definite proportions...................................................... 10 Source/sink term......................................................................... 12 Reaction rates............................................................................ 14 Homogeneous reactions....................................................... 14 Heterogeneous reactions—moving boundary problem................... 14 Surface area..................................................................... 16 Boundary layer.................................................................. 17 Local chemical equilibrium..................................................... 18 Multicomponent Reactive Transport Equations.............................................. 18 Canonical form........................................................................... 19 Thermodynamic databases..................................................... 22 Relation between source terms.............................................. 23 Local partial equilibrium............................................................... 23 Linearly dependent reactions................................................. 27 Multicomponent Reactive Transport Equations............................................. 28 Pure liquid fluid phase................................................................. 29 Ion-exchange reactions......................................................... 30 Two-phase fluid flow......................................................... 32 Multicomponent systems....................................................... 35 Richards equation............................................................... 35 Physical interpretation of the generalized concentration and flux..... 36 Example: Partitioning between aqueous and gaseous phases.......... 38 Asymptotics, Local Equilibrium and Ghost Zones............................................ 40 Scaling..................................................................................... 40 Ghost zones.............................................................................. 43 Quasi-stationary State Approximation......................................................... 44 Single Component System...................................................................... 47 Transient formulation................................................................... 47 Transient and stationary state solution....................................... 48 Quasi-stationary state approximation........................................ 50 Analytical solution.............................................................. 51 Special Topics..................................................................................... 52 VI Charge conservation................................................................... 52 Species-dependent diffusion coefficients..................................... 54 Charge conservation and sorption........................................... 56 Ion-exchange..................................................................... 56 Surface complexation model.................................................. 57 Multicomponent system........................................................ 58 Interpreting results of reactive transport simulations............................. 59 Inverse problem.......................................................................... 61 Applications........................................................................................ 62 Application to acid mine drainage and pyrite oxidation......................... 63 Poços de Caldas redox front migration—The presence of a gap............. 67 Heterogeneous porous media.......................................................... 71 Reaction instability............................................................. 74 Hydrothermal system................................................................... 76 Concluding Remarks.............................................................................. 77 Acknowledgments................................................................................. 78 References.......................................................................................... 79 Chapter 2 C. I. Steefel and K. T. B. MacQuarrie Approaches to modeling of Reactive Transport in porous Media Introduction........................................................................................ 83 Reaction Algorithms for Multicomponent Systems........................................ 85 Mathematical descriptions of reaction systems..................................... 85 Dependent chemical reactions................................................ 89 Including equilibrium reactions.............................................. 90 Treatment of Temporal Derivatives........................................................... 91 Formulating and Solving the Chemical Reaction Equations............................. 93 Fully kinetic formulations.............................................................. 93 Simulating mixed equillibrium-kinetic systems with kinetic formulations................................................................. 94 Numerical packages for fully kinetic formulations...................... 97 Mixed kinetic-equilibrium (DAE) systems.......................................... 97 Decoupled approaches for mixed kinetic-equilibrium systems......... 97 Modeling equilibrium systems........................................................ 98 Including mineral equilibria................................................... 99 Changing basis sets............................................................ 99 Solving equilibrium problems with minimization methods.............100 Solving the nonlinear equations......................................................100 Newton-Raphson method.....................................................100 Computing the Jacobian matrix..............................................102 Modeling Transport Processes.................................................................102 Finite difference methods for spatial discretization...............................103 Finite difference approximations.............................................103 Grid Peclet number............................................................105 Courant number.................................................................106 Amplitude and phase errors..................................................106 Finite element methods for spatial discretization..................................106 High-resolution spatial schemes......................................................109 Example of reactive transport in a physically heterogeneous porous media...............................................................110 Methods for Coupling Reaction and Transport............................................110 One-step or global implicit approach................................................Ill Sequential non-iterative approach (SNIA)..........................................113 vu Strang splitting..................................................................114 Sequential iteration approach (SIA)..................................................114 Potential numerical problems with the SIA method.....................115 Comparison of coupling schemes....................................................116 Example involving first-order decay........................................116 Example involving equilibrium adsorption.................................116 Example involving Monod-kinetics..........................................117 Example of multicomponent aqueous and surface complexation......120 Summary of results from method comparisons..........................121 Summary...........................................................................................124 Acknowledgments.................................................................................125 References..........................................................................................125 Chapter 3 E. H. Oelkers Physical and Chemical Properties of Rocks and Fluids for Chemical Mass Transport calculations Introduction........................................................................................131 Permeability or Hydraulic Conductivity......................................................131 (Glossary of major symbols)...........................................................132 Permeability in sedimentary rocks...................................................136 Permeability in igneous and metamorphic rocks..................................144 Permeability as a function of pressure and temperature in crystalline rocks.................................................................146 Aqueous Diffusion...............................................................................147 Tortuosity and formation factors.....................................................147 Diffusional transport in electrolyte solutions.......................................148 Estimation of aqueous tracer diffusion coefficients...............................152 Uphill and downhill diffusion in electrolyte solutions...........................156 Mechanical and Hydrodynamic Dispersion..................................................157 Laboratory scale dispersion............................................................158 Field scale dispersion (Macrodispersion)...........................................162 Rates of Mineral/Water Interactions...........................................................166 Reactive surface area...................................................................168 Variation of mineral dissolution/crystallization rates with chemical affinity.. 169 Variation of dissolution rates as a function of pH..............................177 Variation of rates in the presence of organic acids..............................180 Conclusions........................................................................................181 Acknowledgments.................................................................................182 References..........................................................................................182 Chapter 4 C. A. J. Appelo Multicomponent ion Exchange and Chromatography in natural Systems Introduction........................................................................................193 Exchange Equilibria and Calculations........................................................194 Exchange equations.....................................................................195 Determination of exchangeable cations..............................................198 Chromatographie Patterns.......................................................................200 Single solute transport, broadening fronts.........................................200 Sharp fronts..............................................................................203 vm Two-cation exchange....................................................................204 Column elution curves.................................................................205 Sorption isotherms from elution curves............................................206 Multicomponent Chrom atography..............................................................210 Self-similar solution.....................................................................211 Field Examples of Ion Chromatography.....................................................214 The case by Valocchi et al. (1981).................................................214 Side reactions in the Valocchi case........................................216 Inverting water compositions.................................................218 Effects of salinity pulses..............................................................218 Freshening of saline aquifers.........................................................221 Summary...........................................................................................223 (Symbols)......................................................................................224 Acknowledgments.................................................................................224 References..........................................................................................225 Chapter 5 D. L. Suarez and J. Simunek Solute transport modeling under Variably Saturated Water Flow Conditions Introduction........................................................................................229 Unsaturated Water Flow........................................................................229 Governing equation.....................................................................229 Hydraulic characteristics................................................................230 Chemical effects on hydraulic conductivity........................................231 Root Water Uptake and Root Growth.......................................................234 Root growth..............................................................................235 Heat Transport....................................................................................237 Concentration/Production/Transport of Carbon Dioxide...................................237 Carbon dioxide production............................................................238 Carbon dioxide transport...............................................................238 Reactive Single Component Solute Transport..............................................241 Local equilibrium models..............................................................241 Nonequilibrium models.................................................................241 Coupled Water Flow and Multicomponent Models........................................244 Equilibrium models......................................................................244 Generalized models......................................................................246 Models with specified chemistry.....................................................247 UNSATCHEM Chemical Model...............................................................249 Calcite precipitation......................................................................249 Precipitation of gypsum................................................................251 Magnesium precipitation................................................................252 Precipitation of nesquehonite and hydromagnesite................................252 Precipitation of sepiolite................................................................253 Silicate weathering.......................................................................254 Cation exchange.........................................................................255 Anion adsorption........................................................................256 Example Simulations Using UNSATCHEM................................................257 Future Developments.............................................................................264 References..........................................................................................264 IX Chapter 6 A. F. B. Tompson K. J. Jackson Reactive Transport in Heterogeneous Systems: An Overview Introduction........................................................................................269 Some Background from a Hydrologie Perspective........................................270 Typical setting............................................................................270 Hydrologie impacts of heterogeneity................................................271 Describing and measuring spatial heterogeneity...................................274 Correlating random fields.....................................................275 Example..........................................................................277 Other SRF methods............................................................277 Depositional and other geometric models.................................278 Dealing with physical heterogeneity.................................................278 Homogenization.................................................................278 Direct simulation................................................................279 The Concept of Chemical Heterogeneity....................................................280 Reactions in porous media............................................................280 Reactions and heterogeneity...........................................................281 Example 1 : Chemical heterogeneity and the aqueous geochemistry..........282 Scenario 1.......................................................................282 Scenario 2.......................................................................282 Scenario 3.......................................................................282 Example 2: Chemical heterogeneity and contaminant mobility.................283 Sorption and retardation.......................................................283 Chemical heterogeneity and sorption.......................................284 Chemical heterogeneity impacts..............................................287 Looking at the Role of Multicomponent Systems.........................................288 A more complicated example system................................................288 Approximate geochemical model......................................................289 Equilibrium speciation.........................................................291 Transport formulation and simulations..............................................293 Simulation strategy.............................................................294 Basic configuration.............................................................295 Modified correlation............................................................295 Modified goethite distribution................................................297 Modified source composition.................................................297 A final remark...........................................................................300 A Field Example Involving Bioremediation.................................................303 Biostimulation............................................................................304 Bioaugmentation..........................................................................304 Bioaugmentation field test.............................................................305 Summary...........................................................................................308 Acknowledgments.................................................................................308 References..........................................................................................308 Chapter 7 B. E. Rittmann J. M. VanBriesen Microbiological Processes in Reactive Modeling Introduction........................................................................................311 Microbiological Reactions.......................................................................312 Primary metabolism.....................................................................312 Special status of oxygen...............................................................314 Secondary utilization....................................................................315 Kinetics....................................................................................315 Active biomass...........................................................................316 Electron-acceptor substrate.............................................................317 Creating mass balance equations.....................................................319 Macroscopic versus biofüm modeling...............................................320 Chemical Reactions Related to Subsurface Microbiology................................320 Acid, base and complexation reactions.............................................321 Interactions between bulk phase reactions and biodégradation.................321 Modeling bulk phase reactions.......................................................323 Additional chemical reactions in the subsurface...................................327 Modeling Examples..............................................................................327 Conclusions........................................................................................332 Acknowledgments.................................................................................332 References..........................................................................................332 Chapter 8 P. Van Cappellen and J.-F. Gaillard BlOGEOCHEMICAL DYNAMICS IN AQUATIC SEDIMENTS Introduction........................................................................................335 Aquatic Sediments: Background...............................................................336 Aquatic sediments as porous media.................................................336 Aquatic sediments as biogeochemical reactors.....................................337 Spatial and temporal scales of early diagenesis...................................339 Trends in field studies.................................................................340 Early Diagenetic Modeling......................................................................342 Historical perspective...................................................................342 The continuum approach...............................................................344 Recipe for a multicomponent early diagenetic model............................345 Transport Processes in Aquatic Sediments..................................................345 Ionic and molecular diffusion.........................................................346 Molecular diffusion: The Stokes-Einstein equation......................346 Ionic diffusion: The multicomponent approach...........................347 Limiting cases...................................................................350 Porosity and tortuosity........................................................351 Biological mixing........................................................................353 Irrigation...................................................................................356 Chemical Processes in Aquatic Sediments..................................................358 Kinetics of organic matter degradation..............................................359 Monod kinetics...........................................................................360 Inhibition and competition.............................................................362 Akinetic model for organic matter degradation..................................363 Secondary reactions.....................................................................366 Continuity Equations.............................................................................368 Application.........................................................................................369 Conclusions........................................................................................370 Acknowledgments.................................................................................371 References..........................................................................................371 n Chapter 9 P. Glynn J. Brown Reactive Transport Modeling of acidic Metal-Contaminated Ground Water at a Site with Sparse Spatial Information Introduction........................................................................................377 Inverse Geochemical Modeling: Basic Theory..............................................378 Mathematical formulation: Inverse modeling with the NETPATH computer code.......................................................................378 Inverse modeling accounting for uncertainties, water and proton mass- balances: The PHREEQC code..................................................380 Assumptions used in inverse modeling.............................................382 Knowledge of flowpaths and the assumption of a steady- state ground-water flow field............................................382 The assumption of chemical steady-state..................................383 How does mixing occur in ground-water systems?..................384 Forward Geochemical Modeling: The PHREEQM and PHREEQC Reactive Transport Codes..............................................................................385 The Pinal Creek Basin Site: Brief Description.............................................387 Geology...................................................................................389 Geohydrology............................................................................390 Inverse Geochemical Modeling at the Pinal Creek Site..................................390 Inverse modeling with NETPATH...................................................391 Examination of end-member waters and their conservative constituents..................................................................391 The thermodynamic state of the end-member waters...................392 NETPATH inverse modeling: First simulation results..................394 The second NETPATH simulation..........................................398 The third NETPATH simulation............................................398 The fourth NETPATH simulation...........................................398 The fifth and sixth NETPATH simulations...............................400 Conclusions from the NETPATH simulations............................400 Inverse geochemical modeling with PHREEQC..........................400 Reactive Transport Modeling at the Pinal Creek Site....................................405 The ground-water velocity field......................................................406 Transport processes and contaminant dilution.....................................406 First simulation example: The Brown (1996) 1-D reactive transport model for the Pinal Creek basin.........................................................407 Second simulation example: The Glynn, Engesgaard and Kipp (1991) 1-D reactive transport model.....................................................408 A 1-D reactive-transport sensitivity analysis on the movement of pH- and pe-controlling mineral fronts..........................................412 A simple model for advective reactive transport of a dissolution front: The MnO2 dissolution front.......................414 Determination of the initial MnO2 and carbonate mineral concentrations...............................................................415 Setup of the 1-D reactive transport simulations.........................416 Simulation results: Movement of the Fe(II)- rich waters and of the MnO2 dissolution front.....................418 Simulation results: Evolution of the low-pH waters....................419 The effect of the initial carbonate to initial Mn( 2 ratio on the evolution of the low-pH waters........................................421 Influence of the aluminum mineral allowed to precipitate on the evolution of the low-pH waters.......................................422 xu Effects of the irreversible dissolution of Ca- and Mg-silicates on the evolution of low-pH Fe(II)-rich waters......................424 The effect of not allowing rhodochrosite precipitation.................425 The CO2 open system simulations.........................................427 The effect of longitudinal dispersion.......................................427 The influence of ion exchange and surface-complexation sorption processes.........................................................428 Other minor effects on the evolution of the low-pH waters.........430 Comparison of the reactive transport simulation results with observations at the Pinal Creek site...................................431 How to obtain U.S. Geological Survey computer codes and the PHREEQM code.......................................436 Conclusions........................................................................................433 Acknowledgments.................................................................................436 References..........................................................................................436 »u
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publishDate 1996
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publisher Mineralogical Soc. of America
record_format marc
series Reviews in mineralogy
series2 Reviews in mineralogy
spellingShingle Reactive transport in porous media
Reviews in mineralogy
Poröser Stoff (DE-588)4046811-2 gnd
Geochemie (DE-588)4020198-3 gnd
Transportprozess (DE-588)4185932-7 gnd
subject_GND (DE-588)4046811-2
(DE-588)4020198-3
(DE-588)4185932-7
(DE-588)1071861417
title Reactive transport in porous media
title_auth Reactive transport in porous media
title_exact_search Reactive transport in porous media
title_full Reactive transport in porous media ed. by Peter C. Lichtner ...
title_fullStr Reactive transport in porous media ed. by Peter C. Lichtner ...
title_full_unstemmed Reactive transport in porous media ed. by Peter C. Lichtner ...
title_short Reactive transport in porous media
title_sort reactive transport in porous media
topic Poröser Stoff (DE-588)4046811-2 gnd
Geochemie (DE-588)4020198-3 gnd
Transportprozess (DE-588)4185932-7 gnd
topic_facet Poröser Stoff
Geochemie
Transportprozess
Konferenzschrift 1996 Golden Colo.
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