Root trait–microbial relationships across tundra plant species
Summary Fine roots, and their functional traits, influence associated rhizosphere microorganisms via root exudation and root litter quality. However, little information is known about their relationship with rhizosphere microbial taxa and functional guilds. We investigated the relationships of 11 fi...
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Veröffentlicht in: | The New phytologist 2021-02, Vol.229 (3), p.1508-1520 |
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creator | Spitzer, Clydecia M. Lindahl, Björn Wardle, David A. Sundqvist, Maja K. Gundale, Michael J. Fanin, Nicolas Kardol, Paul |
description | Summary
Fine roots, and their functional traits, influence associated rhizosphere microorganisms via root exudation and root litter quality. However, little information is known about their relationship with rhizosphere microbial taxa and functional guilds.
We investigated the relationships of 11 fine root traits of 20 sub‐arctic tundra meadow plant species and soil microbial community composition, using phospholipid fatty acids (PLFAs) and high‐throughput sequencing. We primarily focused on the root economics spectrum, as it provides a useful framework to examine plant strategies by integrating the co‐ordination of belowground root traits along a resource acquisition–conservation trade‐off axis.
We found that the chemical axis of the fine root economics spectrum was positively related to fungal to bacterial ratios, but negatively to Gram‐positive to Gram‐negative bacterial ratios. However, this spectrum was unrelated to the relative abundance of functional guilds of soil fungi. Nevertheless, the relative abundance of arbuscular mycorrhizal fungi was positively correlated to root carbon content, but negatively to the numbers of root forks per root length.
Our results suggest that the fine root economics spectrum is important for predicting broader groups of soil microorganisms (i.e. fungi and bacteria), while individual root traits may be more important for predicting soil microbial taxa and functional guilds. |
doi_str_mv | 10.1111/nph.16982 |
format | Article |
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Fine roots, and their functional traits, influence associated rhizosphere microorganisms via root exudation and root litter quality. However, little information is known about their relationship with rhizosphere microbial taxa and functional guilds.
We investigated the relationships of 11 fine root traits of 20 sub‐arctic tundra meadow plant species and soil microbial community composition, using phospholipid fatty acids (PLFAs) and high‐throughput sequencing. We primarily focused on the root economics spectrum, as it provides a useful framework to examine plant strategies by integrating the co‐ordination of belowground root traits along a resource acquisition–conservation trade‐off axis.
We found that the chemical axis of the fine root economics spectrum was positively related to fungal to bacterial ratios, but negatively to Gram‐positive to Gram‐negative bacterial ratios. However, this spectrum was unrelated to the relative abundance of functional guilds of soil fungi. Nevertheless, the relative abundance of arbuscular mycorrhizal fungi was positively correlated to root carbon content, but negatively to the numbers of root forks per root length.
Our results suggest that the fine root economics spectrum is important for predicting broader groups of soil microorganisms (i.e. fungi and bacteria), while individual root traits may be more important for predicting soil microbial taxa and functional guilds.</description><identifier>ISSN: 0028-646X</identifier><identifier>ISSN: 1469-8137</identifier><identifier>EISSN: 1469-8137</identifier><identifier>DOI: 10.1111/nph.16982</identifier><identifier>PMID: 33007155</identifier><language>eng</language><publisher>HOBOKEN: Wiley</publisher><subject>Abundance ; Arbuscular mycorrhizas ; Bacteria ; Carbon content ; Community composition ; Ecology ; Economics ; Ekologi ; Environmental Sciences ; Exudation ; Fatty acids ; fine root traits ; Flowers & plants ; Fungi ; Gram-negative bacteria ; Guilds ; Life Sciences & Biomedicine ; Microorganisms ; Mycorrhizae ; Ordination ; Phospholipids ; Plant Roots ; Plant Sciences ; Plant species ; Plants ; plant–microorganism interactions ; Ratios ; Relative abundance ; Resource conservation ; Rhizosphere ; Rhizosphere microorganisms ; Science & Technology ; Soil ; Soil Microbiology ; Soil microorganisms ; Soils ; Taxa ; Tundra ; tundra ecosystems</subject><ispartof>The New phytologist, 2021-02, Vol.229 (3), p.1508-1520</ispartof><rights>2020 The Authors New Phytologist © 2020 New Phytologist Foundation</rights><rights>2020 The Authors New Phytologist © 2020 New Phytologist Foundation.</rights><rights>2020. This article is published under http://creativecommons.org/licenses/by-nc/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>Attribution</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>true</woscitedreferencessubscribed><woscitedreferencescount>59</woscitedreferencescount><woscitedreferencesoriginalsourcerecordid>wos000583529900001</woscitedreferencesoriginalsourcerecordid><citedby>FETCH-LOGICAL-c5162-198dad7adeaa3d606fa2aca800316567e4e3196f3bb0eb562b288a364b2165993</citedby><cites>FETCH-LOGICAL-c5162-198dad7adeaa3d606fa2aca800316567e4e3196f3bb0eb562b288a364b2165993</cites><orcidid>0000-0001-5947-839X ; 0000-0002-3384-4547 ; 0000-0002-0766-4518 ; 0000-0003-2447-609X ; 0000-0003-4195-855X ; 0000-0002-0476-7335 ; 0000-0001-7065-3435</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2Fnph.16982$$EPDF$$P50$$Gwiley$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2Fnph.16982$$EHTML$$P50$$Gwiley$$Hfree_for_read</linktohtml><link.rule.ids>230,315,553,781,785,886,1418,1434,27929,27930,39263,45579,45580,46414,46838</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/33007155$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://hal.inrae.fr/hal-03006806$$DView record in HAL$$Hfree_for_read</backlink><backlink>$$Uhttps://res.slu.se/id/publ/108719$$DView record from Swedish Publication Index$$Hfree_for_read</backlink></links><search><creatorcontrib>Spitzer, Clydecia M.</creatorcontrib><creatorcontrib>Lindahl, Björn</creatorcontrib><creatorcontrib>Wardle, David A.</creatorcontrib><creatorcontrib>Sundqvist, Maja K.</creatorcontrib><creatorcontrib>Gundale, Michael J.</creatorcontrib><creatorcontrib>Fanin, Nicolas</creatorcontrib><creatorcontrib>Kardol, Paul</creatorcontrib><creatorcontrib>Sveriges lantbruksuniversitet</creatorcontrib><title>Root trait–microbial relationships across tundra plant species</title><title>The New phytologist</title><addtitle>NEW PHYTOL</addtitle><addtitle>New Phytol</addtitle><description>Summary
Fine roots, and their functional traits, influence associated rhizosphere microorganisms via root exudation and root litter quality. However, little information is known about their relationship with rhizosphere microbial taxa and functional guilds.
We investigated the relationships of 11 fine root traits of 20 sub‐arctic tundra meadow plant species and soil microbial community composition, using phospholipid fatty acids (PLFAs) and high‐throughput sequencing. We primarily focused on the root economics spectrum, as it provides a useful framework to examine plant strategies by integrating the co‐ordination of belowground root traits along a resource acquisition–conservation trade‐off axis.
We found that the chemical axis of the fine root economics spectrum was positively related to fungal to bacterial ratios, but negatively to Gram‐positive to Gram‐negative bacterial ratios. However, this spectrum was unrelated to the relative abundance of functional guilds of soil fungi. Nevertheless, the relative abundance of arbuscular mycorrhizal fungi was positively correlated to root carbon content, but negatively to the numbers of root forks per root length.
Our results suggest that the fine root economics spectrum is important for predicting broader groups of soil microorganisms (i.e. fungi and bacteria), while individual root traits may be more important for predicting soil microbial taxa and functional guilds.</description><subject>Abundance</subject><subject>Arbuscular mycorrhizas</subject><subject>Bacteria</subject><subject>Carbon content</subject><subject>Community composition</subject><subject>Ecology</subject><subject>Economics</subject><subject>Ekologi</subject><subject>Environmental Sciences</subject><subject>Exudation</subject><subject>Fatty acids</subject><subject>fine root traits</subject><subject>Flowers & plants</subject><subject>Fungi</subject><subject>Gram-negative bacteria</subject><subject>Guilds</subject><subject>Life Sciences & Biomedicine</subject><subject>Microorganisms</subject><subject>Mycorrhizae</subject><subject>Ordination</subject><subject>Phospholipids</subject><subject>Plant Roots</subject><subject>Plant Sciences</subject><subject>Plant species</subject><subject>Plants</subject><subject>plant–microorganism interactions</subject><subject>Ratios</subject><subject>Relative abundance</subject><subject>Resource conservation</subject><subject>Rhizosphere</subject><subject>Rhizosphere microorganisms</subject><subject>Science & Technology</subject><subject>Soil</subject><subject>Soil Microbiology</subject><subject>Soil microorganisms</subject><subject>Soils</subject><subject>Taxa</subject><subject>Tundra</subject><subject>tundra ecosystems</subject><issn>0028-646X</issn><issn>1469-8137</issn><issn>1469-8137</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>24P</sourceid><sourceid>WIN</sourceid><sourceid>HGBXW</sourceid><sourceid>EIF</sourceid><sourceid>D8T</sourceid><recordid>eNqNkt-K1DAUxoO4uOPohS8gBW8U6Wz-tGl6Iy6DuyMMKqLgXUjbUydLp-km7S575zv4hvsknk7H0V0Q7E1K8vtOvnO-EPKM0QXD76TtNgsmc8UfkBlLZB4rJrKHZEYpV7FM5Ldj8jiEC0ppnkr-iBwLQWnG0nRG3n52ro96b2x_--Pn1pbeFdY0kYfG9Na1YWO7EBncDiHqh7byJuoa0_ZR6KC0EJ6Qo9o0AZ7u1zn5evbuy3IVrz-ev1-eruMyZZLHLFeVqTJTgTGiklTWhpvSKEoFk6nMIAHBclmLoqBQoMuCK2WETAqO53ku5mQx1Q3X0A2F7rzdGn-jnbE6NENh_LjoAJpRlbFR8GYSIL2FqoQWu2zu6O6etHajv7srnSnOOPqak1dTgc092ep0rcc9ilOUisorhuzL_WXeXQ4Qer21oYQGJwVuCJoniUqoyNKx7It76IUbfIuzQwoBiU2nfy7fTd5DfXDAqB5D1xi63oWO7PO_Oz2Qv1NGQE3ANRSuDhhbW8IBw2eRKpHyPMc_ypa23yW_dEPbo_T1_0uRPtnTtoGbf1vWHz6tJu-_AHs72BU</recordid><startdate>202102</startdate><enddate>202102</enddate><creator>Spitzer, Clydecia M.</creator><creator>Lindahl, Björn</creator><creator>Wardle, David A.</creator><creator>Sundqvist, Maja K.</creator><creator>Gundale, Michael J.</creator><creator>Fanin, Nicolas</creator><creator>Kardol, Paul</creator><general>Wiley</general><general>Wiley Subscription Services, Inc</general><general>John Wiley and Sons Inc</general><scope>24P</scope><scope>WIN</scope><scope>BLEPL</scope><scope>DTL</scope><scope>HGBXW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QO</scope><scope>7SN</scope><scope>8FD</scope><scope>C1K</scope><scope>F1W</scope><scope>FR3</scope><scope>H95</scope><scope>L.G</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>1XC</scope><scope>VOOES</scope><scope>5PM</scope><scope>ADTPV</scope><scope>AOWAS</scope><scope>D8T</scope><scope>ZZAVC</scope><orcidid>https://orcid.org/0000-0001-5947-839X</orcidid><orcidid>https://orcid.org/0000-0002-3384-4547</orcidid><orcidid>https://orcid.org/0000-0002-0766-4518</orcidid><orcidid>https://orcid.org/0000-0003-2447-609X</orcidid><orcidid>https://orcid.org/0000-0003-4195-855X</orcidid><orcidid>https://orcid.org/0000-0002-0476-7335</orcidid><orcidid>https://orcid.org/0000-0001-7065-3435</orcidid></search><sort><creationdate>202102</creationdate><title>Root trait–microbial relationships across tundra plant species</title><author>Spitzer, Clydecia M. ; Lindahl, Björn ; Wardle, David A. ; Sundqvist, Maja K. ; Gundale, Michael J. ; Fanin, Nicolas ; Kardol, Paul</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5162-198dad7adeaa3d606fa2aca800316567e4e3196f3bb0eb562b288a364b2165993</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Abundance</topic><topic>Arbuscular mycorrhizas</topic><topic>Bacteria</topic><topic>Carbon content</topic><topic>Community composition</topic><topic>Ecology</topic><topic>Economics</topic><topic>Ekologi</topic><topic>Environmental Sciences</topic><topic>Exudation</topic><topic>Fatty acids</topic><topic>fine root traits</topic><topic>Flowers & plants</topic><topic>Fungi</topic><topic>Gram-negative bacteria</topic><topic>Guilds</topic><topic>Life Sciences & Biomedicine</topic><topic>Microorganisms</topic><topic>Mycorrhizae</topic><topic>Ordination</topic><topic>Phospholipids</topic><topic>Plant Roots</topic><topic>Plant Sciences</topic><topic>Plant species</topic><topic>Plants</topic><topic>plant–microorganism interactions</topic><topic>Ratios</topic><topic>Relative abundance</topic><topic>Resource conservation</topic><topic>Rhizosphere</topic><topic>Rhizosphere microorganisms</topic><topic>Science & Technology</topic><topic>Soil</topic><topic>Soil Microbiology</topic><topic>Soil microorganisms</topic><topic>Soils</topic><topic>Taxa</topic><topic>Tundra</topic><topic>tundra ecosystems</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Spitzer, Clydecia M.</creatorcontrib><creatorcontrib>Lindahl, Björn</creatorcontrib><creatorcontrib>Wardle, David A.</creatorcontrib><creatorcontrib>Sundqvist, Maja K.</creatorcontrib><creatorcontrib>Gundale, Michael J.</creatorcontrib><creatorcontrib>Fanin, Nicolas</creatorcontrib><creatorcontrib>Kardol, Paul</creatorcontrib><creatorcontrib>Sveriges lantbruksuniversitet</creatorcontrib><collection>Wiley-Blackwell Open Access Titles</collection><collection>Wiley Free Content</collection><collection>Web of Science Core Collection</collection><collection>Science Citation Index Expanded</collection><collection>Web of Science - Science Citation Index Expanded - 2021</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Biotechnology Research Abstracts</collection><collection>Ecology Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>Hyper Article en Ligne (HAL)</collection><collection>Hyper Article en Ligne (HAL) (Open Access)</collection><collection>PubMed Central (Full Participant titles)</collection><collection>SwePub</collection><collection>SwePub Articles</collection><collection>SWEPUB Freely available online</collection><collection>SwePub Articles full text</collection><jtitle>The New phytologist</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Spitzer, Clydecia M.</au><au>Lindahl, Björn</au><au>Wardle, David A.</au><au>Sundqvist, Maja K.</au><au>Gundale, Michael J.</au><au>Fanin, Nicolas</au><au>Kardol, Paul</au><aucorp>Sveriges lantbruksuniversitet</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Root trait–microbial relationships across tundra plant species</atitle><jtitle>The New phytologist</jtitle><stitle>NEW PHYTOL</stitle><addtitle>New Phytol</addtitle><date>2021-02</date><risdate>2021</risdate><volume>229</volume><issue>3</issue><spage>1508</spage><epage>1520</epage><pages>1508-1520</pages><issn>0028-646X</issn><issn>1469-8137</issn><eissn>1469-8137</eissn><abstract>Summary
Fine roots, and their functional traits, influence associated rhizosphere microorganisms via root exudation and root litter quality. However, little information is known about their relationship with rhizosphere microbial taxa and functional guilds.
We investigated the relationships of 11 fine root traits of 20 sub‐arctic tundra meadow plant species and soil microbial community composition, using phospholipid fatty acids (PLFAs) and high‐throughput sequencing. We primarily focused on the root economics spectrum, as it provides a useful framework to examine plant strategies by integrating the co‐ordination of belowground root traits along a resource acquisition–conservation trade‐off axis.
We found that the chemical axis of the fine root economics spectrum was positively related to fungal to bacterial ratios, but negatively to Gram‐positive to Gram‐negative bacterial ratios. However, this spectrum was unrelated to the relative abundance of functional guilds of soil fungi. Nevertheless, the relative abundance of arbuscular mycorrhizal fungi was positively correlated to root carbon content, but negatively to the numbers of root forks per root length.
Our results suggest that the fine root economics spectrum is important for predicting broader groups of soil microorganisms (i.e. fungi and bacteria), while individual root traits may be more important for predicting soil microbial taxa and functional guilds.</abstract><cop>HOBOKEN</cop><pub>Wiley</pub><pmid>33007155</pmid><doi>10.1111/nph.16982</doi><tpages>13</tpages><orcidid>https://orcid.org/0000-0001-5947-839X</orcidid><orcidid>https://orcid.org/0000-0002-3384-4547</orcidid><orcidid>https://orcid.org/0000-0002-0766-4518</orcidid><orcidid>https://orcid.org/0000-0003-2447-609X</orcidid><orcidid>https://orcid.org/0000-0003-4195-855X</orcidid><orcidid>https://orcid.org/0000-0002-0476-7335</orcidid><orcidid>https://orcid.org/0000-0001-7065-3435</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Abundance Arbuscular mycorrhizas Bacteria Carbon content Community composition Ecology Economics Ekologi Environmental Sciences Exudation Fatty acids fine root traits Flowers & plants Fungi Gram-negative bacteria Guilds Life Sciences & Biomedicine Microorganisms Mycorrhizae Ordination Phospholipids Plant Roots Plant Sciences Plant species Plants plant–microorganism interactions Ratios Relative abundance Resource conservation Rhizosphere Rhizosphere microorganisms Science & Technology Soil Soil Microbiology Soil microorganisms Soils Taxa Tundra tundra ecosystems |
title | Root trait–microbial relationships across tundra plant species |
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