Simulating the outcome of a clinical intervention from a data‐driven model of Alzheimer's disease progression
Background The recent outcomes of clinical trials in Alzheimer's Disease (AD) underline the critical importance of timing for drug intervention, and the need to identify optimal intervention windows along the disease history to maximize cognitive benefit. In this work, we propose a data‐driven...
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creator | Nader, Clement Abi Ayache, Nicholas Robert, Philippe Lorenzi, Marco |
description | Background
The recent outcomes of clinical trials in Alzheimer's Disease (AD) underline the critical importance of timing for drug intervention, and the need to identify optimal intervention windows along the disease history to maximize cognitive benefit. In this work, we propose a data‐driven progression model of AD allowing simulation of the effect of disease modifying drugs along the entire history of the pathology.
Method
We propose a generative model of disease progression, aimed at identifying the dynamical relationships between multi‐modal clinical and imaging data. Our data consists of AV45‐PET, FDG‐PET, MR images, and clinical scores for 311 ADNI individuals (49 healthy, 113 MCI, 33 MCI converted to AD, and 116 AD patients) for a total of 2188 longitudinal measures. The model is based on a dynamical system relating the multi‐modal information, and is formulated under realistic clinical hypothesis to provide plausible disease progression simulation and predictions.
Result
Figure 1 shows the modelled disease progression for grey matter atrophy, glucose hypometabolism, amyloid concentration, and cognitive decline. We notice a global increase of amyloid, while grey matter atrophy and glucose hypometabolism map prevalently temporal and parietal regions. Clinical scores exhibit a non‐linear profile, accelerating during the latest disease stages. The individual disease severity associated to such progression shows significant separation across clinical groups (p |
doi_str_mv | 10.1002/alz.047385 |
format | Article |
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The recent outcomes of clinical trials in Alzheimer's Disease (AD) underline the critical importance of timing for drug intervention, and the need to identify optimal intervention windows along the disease history to maximize cognitive benefit. In this work, we propose a data‐driven progression model of AD allowing simulation of the effect of disease modifying drugs along the entire history of the pathology.
Method
We propose a generative model of disease progression, aimed at identifying the dynamical relationships between multi‐modal clinical and imaging data. Our data consists of AV45‐PET, FDG‐PET, MR images, and clinical scores for 311 ADNI individuals (49 healthy, 113 MCI, 33 MCI converted to AD, and 116 AD patients) for a total of 2188 longitudinal measures. The model is based on a dynamical system relating the multi‐modal information, and is formulated under realistic clinical hypothesis to provide plausible disease progression simulation and predictions.
Result
Figure 1 shows the modelled disease progression for grey matter atrophy, glucose hypometabolism, amyloid concentration, and cognitive decline. We notice a global increase of amyloid, while grey matter atrophy and glucose hypometabolism map prevalently temporal and parietal regions. Clinical scores exhibit a non‐linear profile, accelerating during the latest disease stages. The individual disease severity associated to such progression shows significant separation across clinical groups (p<0.01, Figure 2). Finally, our model allows to simulate the intervention outcome of hypothetical modifiers blocking amyloid deposition at a given time. Table 1 shows the values of ADAS11 and MMSE at conversion time, depending on the time at which we simulated amyloid blockage. Mild differences are obtained when complete blockage is performed at least 3 years before conversion, while stronger significant effects appear at intervention time of 10 years before conversion.
Conclusion
We presented a model of AD progression, allowing to simulate the effect of disease modifying drugs on the clinical outcome at any stage of the natural history of AD. The model is flexible and future extensions are currently under study, to account for different kind of PET tracers, and for APOE4 genotyping.</description><identifier>ISSN: 1552-5260</identifier><identifier>EISSN: 1552-5279</identifier><identifier>DOI: 10.1002/alz.047385</identifier><language>eng</language><ispartof>Alzheimer's & dementia, 2020-12, Vol.16, p.n/a</ispartof><rights>2020 the Alzheimer's Association</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2Falz.047385$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2Falz.047385$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,776,780,1411,27901,27902,45550,45551</link.rule.ids></links><search><creatorcontrib>Nader, Clement Abi</creatorcontrib><creatorcontrib>Ayache, Nicholas</creatorcontrib><creatorcontrib>Robert, Philippe</creatorcontrib><creatorcontrib>Lorenzi, Marco</creatorcontrib><title>Simulating the outcome of a clinical intervention from a data‐driven model of Alzheimer's disease progression</title><title>Alzheimer's & dementia</title><description>Background
The recent outcomes of clinical trials in Alzheimer's Disease (AD) underline the critical importance of timing for drug intervention, and the need to identify optimal intervention windows along the disease history to maximize cognitive benefit. In this work, we propose a data‐driven progression model of AD allowing simulation of the effect of disease modifying drugs along the entire history of the pathology.
Method
We propose a generative model of disease progression, aimed at identifying the dynamical relationships between multi‐modal clinical and imaging data. Our data consists of AV45‐PET, FDG‐PET, MR images, and clinical scores for 311 ADNI individuals (49 healthy, 113 MCI, 33 MCI converted to AD, and 116 AD patients) for a total of 2188 longitudinal measures. The model is based on a dynamical system relating the multi‐modal information, and is formulated under realistic clinical hypothesis to provide plausible disease progression simulation and predictions.
Result
Figure 1 shows the modelled disease progression for grey matter atrophy, glucose hypometabolism, amyloid concentration, and cognitive decline. We notice a global increase of amyloid, while grey matter atrophy and glucose hypometabolism map prevalently temporal and parietal regions. Clinical scores exhibit a non‐linear profile, accelerating during the latest disease stages. The individual disease severity associated to such progression shows significant separation across clinical groups (p<0.01, Figure 2). Finally, our model allows to simulate the intervention outcome of hypothetical modifiers blocking amyloid deposition at a given time. Table 1 shows the values of ADAS11 and MMSE at conversion time, depending on the time at which we simulated amyloid blockage. Mild differences are obtained when complete blockage is performed at least 3 years before conversion, while stronger significant effects appear at intervention time of 10 years before conversion.
Conclusion
We presented a model of AD progression, allowing to simulate the effect of disease modifying drugs on the clinical outcome at any stage of the natural history of AD. The model is flexible and future extensions are currently under study, to account for different kind of PET tracers, and for APOE4 genotyping.</description><issn>1552-5260</issn><issn>1552-5279</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid/><recordid>eNo9kMFKAzEYhIMoWKsXnyA3T1uTzWazOZaiVih4sCcvy7_J3zaS3ZRkq7QnH8Fn9EncUvE0A8MMw0fILWcTzlh-D_4wYYUSlTwjIy5lnslc6fN_X7JLcpXSO2MFq7gckfDq2p2H3nVr2m-Qhl1vQjvoigI13nXOgKeu6zF-YNe70NFVDO0QWujh5-vbRjcEtA0W_bE19YcNuhbjXaLWJYSEdBvDOmJKQ_uaXKzAJ7z50zFZPj4sZ_Ns8fL0PJsusp2qZKaxsioXVoMqOTYy5xVXHMzwmpUWuZYst4YLJRulTSmKRilojAZdCQSlxJjw0-yn87ivt9G1EPc1Z_URUz1gqk-Y6uni7eTEL2lxX8g</recordid><startdate>202012</startdate><enddate>202012</enddate><creator>Nader, Clement Abi</creator><creator>Ayache, Nicholas</creator><creator>Robert, Philippe</creator><creator>Lorenzi, Marco</creator><scope/></search><sort><creationdate>202012</creationdate><title>Simulating the outcome of a clinical intervention from a data‐driven model of Alzheimer's disease progression</title><author>Nader, Clement Abi ; Ayache, Nicholas ; Robert, Philippe ; Lorenzi, Marco</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-u785-9e8d723d9a761eb5218171ac04006de19502dc1375b79c634b77abc9a983ea773</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Nader, Clement Abi</creatorcontrib><creatorcontrib>Ayache, Nicholas</creatorcontrib><creatorcontrib>Robert, Philippe</creatorcontrib><creatorcontrib>Lorenzi, Marco</creatorcontrib><jtitle>Alzheimer's & dementia</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Nader, Clement Abi</au><au>Ayache, Nicholas</au><au>Robert, Philippe</au><au>Lorenzi, Marco</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Simulating the outcome of a clinical intervention from a data‐driven model of Alzheimer's disease progression</atitle><jtitle>Alzheimer's & dementia</jtitle><date>2020-12</date><risdate>2020</risdate><volume>16</volume><epage>n/a</epage><issn>1552-5260</issn><eissn>1552-5279</eissn><abstract>Background
The recent outcomes of clinical trials in Alzheimer's Disease (AD) underline the critical importance of timing for drug intervention, and the need to identify optimal intervention windows along the disease history to maximize cognitive benefit. In this work, we propose a data‐driven progression model of AD allowing simulation of the effect of disease modifying drugs along the entire history of the pathology.
Method
We propose a generative model of disease progression, aimed at identifying the dynamical relationships between multi‐modal clinical and imaging data. Our data consists of AV45‐PET, FDG‐PET, MR images, and clinical scores for 311 ADNI individuals (49 healthy, 113 MCI, 33 MCI converted to AD, and 116 AD patients) for a total of 2188 longitudinal measures. The model is based on a dynamical system relating the multi‐modal information, and is formulated under realistic clinical hypothesis to provide plausible disease progression simulation and predictions.
Result
Figure 1 shows the modelled disease progression for grey matter atrophy, glucose hypometabolism, amyloid concentration, and cognitive decline. We notice a global increase of amyloid, while grey matter atrophy and glucose hypometabolism map prevalently temporal and parietal regions. Clinical scores exhibit a non‐linear profile, accelerating during the latest disease stages. The individual disease severity associated to such progression shows significant separation across clinical groups (p<0.01, Figure 2). Finally, our model allows to simulate the intervention outcome of hypothetical modifiers blocking amyloid deposition at a given time. Table 1 shows the values of ADAS11 and MMSE at conversion time, depending on the time at which we simulated amyloid blockage. Mild differences are obtained when complete blockage is performed at least 3 years before conversion, while stronger significant effects appear at intervention time of 10 years before conversion.
Conclusion
We presented a model of AD progression, allowing to simulate the effect of disease modifying drugs on the clinical outcome at any stage of the natural history of AD. The model is flexible and future extensions are currently under study, to account for different kind of PET tracers, and for APOE4 genotyping.</abstract><doi>10.1002/alz.047385</doi><tpages>2</tpages><oa>free_for_read</oa></addata></record> |
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title | Simulating the outcome of a clinical intervention from a data‐driven model of Alzheimer's disease progression |
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