First report of the optrA-carrying multidrug resistance genomic island in Campylobacter jejuni isolated from pigeon meat
Campylobacter spp., such as Campylobacter jejuni and Campylobacter coli, are important zoonotic Gram-negative pathogens that cause acute intestinal diseases in humans. The optrA gene, encoding an ATP-binding cassette F (ABC-F) protein that confers resistance to oxazolidinones and phenicols, has been...
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Veröffentlicht in: | International journal of food microbiology 2021-09, Vol.354, p.109320-109320, Article 109320 |
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container_title | International journal of food microbiology |
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creator | Tang, Shengjun Yang, Runshi Wu, Qingping Ding, Yu Wang, Zhi Zhang, Jumei Lei, Tao Wu, Shi Zhang, Feng Zhang, Weipei Xue, Liang Zhang, Youxiong Wei, Xianhu Pang, Rui Wang, Juan |
description | Campylobacter spp., such as Campylobacter jejuni and Campylobacter coli, are important zoonotic Gram-negative pathogens that cause acute intestinal diseases in humans. The optrA gene, encoding an ATP-binding cassette F (ABC-F) protein that confers resistance to oxazolidinones and phenicols, has been found in C. coli in China. In this study, the optrA gene was first identified in C. jejuni collected from retail meat in China from 2013 to 2016. Nine strains, isolated from a pigeon meat sample, carry the optrA gene. The molecular characteristics of the optrA-positive strains were determined by whole genome sequencing. Pulsed-field gel electrophoresis, multilocus sequence typing, and single nucleotide polymorphism analyses demonstrated that the nine optrA-positive isolates were genetically homogeneous. Phylogenetic characteristics and sequence comparison revealed that optrA was located on a chromosome-borne multidrug resistance genomic island. The optrA gene along with the tet(O) gene formed two different translocatable units (TUs), thereby supporting the transmission of TU-associated resistance genes. The emergence and spread of such TUs and strains are of great concern in terms of food safety, and measures must be implemented to avoid their dissemination in other Gram-negative bacteria and food chains.
•Nine linezolid and florfenicol resistance Campylobacter jejuni were isolated.•All strains were optrA positive and belonged to ST9560.•The chromosome-borne optrA gene were located within a 21,333 bp MDRGI.•Two transposition units were formed via the IS1216E and tet(O). |
doi_str_mv | 10.1016/j.ijfoodmicro.2021.109320 |
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•Nine linezolid and florfenicol resistance Campylobacter jejuni were isolated.•All strains were optrA positive and belonged to ST9560.•The chromosome-borne optrA gene were located within a 21,333 bp MDRGI.•Two transposition units were formed via the IS1216E and tet(O).</description><identifier>ISSN: 0168-1605</identifier><identifier>EISSN: 1879-3460</identifier><identifier>DOI: 10.1016/j.ijfoodmicro.2021.109320</identifier><language>eng</language><publisher>Amsterdam: Elsevier B.V</publisher><subject>Adenosine triphosphate ; Bacteria ; Campylobacter ; Campylobacter jejuni ; Chromosomes ; Electrophoresis ; Florfenicol ; Food chains ; Food safety ; Gel electrophoresis ; Gene polymorphism ; Gene sequencing ; Genomic islands ; Genomics ; Gram-negative bacteria ; MDRGI ; Meat ; Multidrug resistance ; Multidrug resistant organisms ; Multilocus sequence typing ; Nucleotide sequence ; Nucleotides ; optrA ; Oxazolidinone ; Oxazolidinones ; Phylogeny ; Pigeons ; Polymorphism ; Pulsed-field gel electrophoresis ; Single-nucleotide polymorphism ; Strains (organisms) ; Whole genome sequencing ; Zoonoses</subject><ispartof>International journal of food microbiology, 2021-09, Vol.354, p.109320-109320, Article 109320</ispartof><rights>2021 Elsevier B.V.</rights><rights>Copyright Elsevier BV Sep 16, 2021</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c448t-f133ca403d9a61ce72fc03436796565301c9ea2e6c6d2cae583e8c2e5f4c962e3</citedby><cites>FETCH-LOGICAL-c448t-f133ca403d9a61ce72fc03436796565301c9ea2e6c6d2cae583e8c2e5f4c962e3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.ijfoodmicro.2021.109320$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,780,784,3550,27924,27925,45995</link.rule.ids></links><search><creatorcontrib>Tang, Shengjun</creatorcontrib><creatorcontrib>Yang, Runshi</creatorcontrib><creatorcontrib>Wu, Qingping</creatorcontrib><creatorcontrib>Ding, Yu</creatorcontrib><creatorcontrib>Wang, Zhi</creatorcontrib><creatorcontrib>Zhang, Jumei</creatorcontrib><creatorcontrib>Lei, Tao</creatorcontrib><creatorcontrib>Wu, Shi</creatorcontrib><creatorcontrib>Zhang, Feng</creatorcontrib><creatorcontrib>Zhang, Weipei</creatorcontrib><creatorcontrib>Xue, Liang</creatorcontrib><creatorcontrib>Zhang, Youxiong</creatorcontrib><creatorcontrib>Wei, Xianhu</creatorcontrib><creatorcontrib>Pang, Rui</creatorcontrib><creatorcontrib>Wang, Juan</creatorcontrib><title>First report of the optrA-carrying multidrug resistance genomic island in Campylobacter jejuni isolated from pigeon meat</title><title>International journal of food microbiology</title><description>Campylobacter spp., such as Campylobacter jejuni and Campylobacter coli, are important zoonotic Gram-negative pathogens that cause acute intestinal diseases in humans. The optrA gene, encoding an ATP-binding cassette F (ABC-F) protein that confers resistance to oxazolidinones and phenicols, has been found in C. coli in China. In this study, the optrA gene was first identified in C. jejuni collected from retail meat in China from 2013 to 2016. Nine strains, isolated from a pigeon meat sample, carry the optrA gene. The molecular characteristics of the optrA-positive strains were determined by whole genome sequencing. Pulsed-field gel electrophoresis, multilocus sequence typing, and single nucleotide polymorphism analyses demonstrated that the nine optrA-positive isolates were genetically homogeneous. Phylogenetic characteristics and sequence comparison revealed that optrA was located on a chromosome-borne multidrug resistance genomic island. The optrA gene along with the tet(O) gene formed two different translocatable units (TUs), thereby supporting the transmission of TU-associated resistance genes. The emergence and spread of such TUs and strains are of great concern in terms of food safety, and measures must be implemented to avoid their dissemination in other Gram-negative bacteria and food chains.
•Nine linezolid and florfenicol resistance Campylobacter jejuni were isolated.•All strains were optrA positive and belonged to ST9560.•The chromosome-borne optrA gene were located within a 21,333 bp MDRGI.•Two transposition units were formed via the IS1216E and tet(O).</description><subject>Adenosine triphosphate</subject><subject>Bacteria</subject><subject>Campylobacter</subject><subject>Campylobacter jejuni</subject><subject>Chromosomes</subject><subject>Electrophoresis</subject><subject>Florfenicol</subject><subject>Food chains</subject><subject>Food safety</subject><subject>Gel electrophoresis</subject><subject>Gene polymorphism</subject><subject>Gene sequencing</subject><subject>Genomic islands</subject><subject>Genomics</subject><subject>Gram-negative bacteria</subject><subject>MDRGI</subject><subject>Meat</subject><subject>Multidrug resistance</subject><subject>Multidrug resistant organisms</subject><subject>Multilocus sequence typing</subject><subject>Nucleotide sequence</subject><subject>Nucleotides</subject><subject>optrA</subject><subject>Oxazolidinone</subject><subject>Oxazolidinones</subject><subject>Phylogeny</subject><subject>Pigeons</subject><subject>Polymorphism</subject><subject>Pulsed-field gel electrophoresis</subject><subject>Single-nucleotide polymorphism</subject><subject>Strains (organisms)</subject><subject>Whole genome sequencing</subject><subject>Zoonoses</subject><issn>0168-1605</issn><issn>1879-3460</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><recordid>eNqNkU1P5DAMhqMVK-0w7H_IiguXDvlo0-Y4GvElIXGBc5RN3dlUbdN1UsT8ezIaDogTJ0v2Y_u1X0L-cLbhjKvrfuP7LoR29A7DRjDBc15LwX6QFW9qXchSsTOyymxTcMWqX-Q8xp4xVknJVuTt1mNMFGEOmGjoaPoHNMwJt4WziAc_7em4DMm3uOwzFn1MdnJA9zCFvJT6ONippX6iOzvOhyH8tS4B0h76ZfK5HAaboKUdhpHOfg9hoiPYdEF-dnaI8PsjrsnL7c3z7r54fLp72G0fC1eWTSo6LqWzJZOttoo7qEXnmCylqrWqVCUZdxqsAOVUK5yFqpHQOAFVVzqtBMg1uTrNnTH8XyAmM_roYMiqISzRiKrUXOta1xm9_IL2YcEpq8tULRQvdXWk9InKD48RoTMz-tHiwXBmjp6Y3nzyxBw9MSdPcu_u1Av54lcPaKLzkN_ZegSXTBv8N6a8A-K8nQg</recordid><startdate>20210916</startdate><enddate>20210916</enddate><creator>Tang, Shengjun</creator><creator>Yang, Runshi</creator><creator>Wu, Qingping</creator><creator>Ding, Yu</creator><creator>Wang, Zhi</creator><creator>Zhang, Jumei</creator><creator>Lei, Tao</creator><creator>Wu, Shi</creator><creator>Zhang, Feng</creator><creator>Zhang, Weipei</creator><creator>Xue, Liang</creator><creator>Zhang, Youxiong</creator><creator>Wei, Xianhu</creator><creator>Pang, Rui</creator><creator>Wang, Juan</creator><general>Elsevier B.V</general><general>Elsevier BV</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7QO</scope><scope>7QR</scope><scope>7T7</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20210916</creationdate><title>First report of the optrA-carrying multidrug resistance genomic island in Campylobacter jejuni isolated from pigeon meat</title><author>Tang, Shengjun ; Yang, Runshi ; Wu, Qingping ; Ding, Yu ; Wang, Zhi ; Zhang, Jumei ; Lei, Tao ; Wu, Shi ; Zhang, Feng ; Zhang, Weipei ; Xue, Liang ; Zhang, Youxiong ; Wei, Xianhu ; Pang, Rui ; Wang, Juan</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c448t-f133ca403d9a61ce72fc03436796565301c9ea2e6c6d2cae583e8c2e5f4c962e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Adenosine triphosphate</topic><topic>Bacteria</topic><topic>Campylobacter</topic><topic>Campylobacter jejuni</topic><topic>Chromosomes</topic><topic>Electrophoresis</topic><topic>Florfenicol</topic><topic>Food chains</topic><topic>Food safety</topic><topic>Gel electrophoresis</topic><topic>Gene polymorphism</topic><topic>Gene sequencing</topic><topic>Genomic islands</topic><topic>Genomics</topic><topic>Gram-negative bacteria</topic><topic>MDRGI</topic><topic>Meat</topic><topic>Multidrug resistance</topic><topic>Multidrug resistant organisms</topic><topic>Multilocus sequence typing</topic><topic>Nucleotide sequence</topic><topic>Nucleotides</topic><topic>optrA</topic><topic>Oxazolidinone</topic><topic>Oxazolidinones</topic><topic>Phylogeny</topic><topic>Pigeons</topic><topic>Polymorphism</topic><topic>Pulsed-field gel electrophoresis</topic><topic>Single-nucleotide polymorphism</topic><topic>Strains (organisms)</topic><topic>Whole genome sequencing</topic><topic>Zoonoses</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Tang, Shengjun</creatorcontrib><creatorcontrib>Yang, Runshi</creatorcontrib><creatorcontrib>Wu, Qingping</creatorcontrib><creatorcontrib>Ding, Yu</creatorcontrib><creatorcontrib>Wang, Zhi</creatorcontrib><creatorcontrib>Zhang, Jumei</creatorcontrib><creatorcontrib>Lei, Tao</creatorcontrib><creatorcontrib>Wu, Shi</creatorcontrib><creatorcontrib>Zhang, Feng</creatorcontrib><creatorcontrib>Zhang, Weipei</creatorcontrib><creatorcontrib>Xue, Liang</creatorcontrib><creatorcontrib>Zhang, Youxiong</creatorcontrib><creatorcontrib>Wei, Xianhu</creatorcontrib><creatorcontrib>Pang, Rui</creatorcontrib><creatorcontrib>Wang, Juan</creatorcontrib><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Biotechnology Research Abstracts</collection><collection>Chemoreception Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of food microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Tang, Shengjun</au><au>Yang, Runshi</au><au>Wu, Qingping</au><au>Ding, Yu</au><au>Wang, Zhi</au><au>Zhang, Jumei</au><au>Lei, Tao</au><au>Wu, Shi</au><au>Zhang, Feng</au><au>Zhang, Weipei</au><au>Xue, Liang</au><au>Zhang, Youxiong</au><au>Wei, Xianhu</au><au>Pang, Rui</au><au>Wang, Juan</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>First report of the optrA-carrying multidrug resistance genomic island in Campylobacter jejuni isolated from pigeon meat</atitle><jtitle>International journal of food microbiology</jtitle><date>2021-09-16</date><risdate>2021</risdate><volume>354</volume><spage>109320</spage><epage>109320</epage><pages>109320-109320</pages><artnum>109320</artnum><issn>0168-1605</issn><eissn>1879-3460</eissn><abstract>Campylobacter spp., such as Campylobacter jejuni and Campylobacter coli, are important zoonotic Gram-negative pathogens that cause acute intestinal diseases in humans. The optrA gene, encoding an ATP-binding cassette F (ABC-F) protein that confers resistance to oxazolidinones and phenicols, has been found in C. coli in China. In this study, the optrA gene was first identified in C. jejuni collected from retail meat in China from 2013 to 2016. Nine strains, isolated from a pigeon meat sample, carry the optrA gene. The molecular characteristics of the optrA-positive strains were determined by whole genome sequencing. Pulsed-field gel electrophoresis, multilocus sequence typing, and single nucleotide polymorphism analyses demonstrated that the nine optrA-positive isolates were genetically homogeneous. Phylogenetic characteristics and sequence comparison revealed that optrA was located on a chromosome-borne multidrug resistance genomic island. The optrA gene along with the tet(O) gene formed two different translocatable units (TUs), thereby supporting the transmission of TU-associated resistance genes. The emergence and spread of such TUs and strains are of great concern in terms of food safety, and measures must be implemented to avoid their dissemination in other Gram-negative bacteria and food chains.
•Nine linezolid and florfenicol resistance Campylobacter jejuni were isolated.•All strains were optrA positive and belonged to ST9560.•The chromosome-borne optrA gene were located within a 21,333 bp MDRGI.•Two transposition units were formed via the IS1216E and tet(O).</abstract><cop>Amsterdam</cop><pub>Elsevier B.V</pub><doi>10.1016/j.ijfoodmicro.2021.109320</doi><tpages>1</tpages></addata></record> |
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subjects | Adenosine triphosphate Bacteria Campylobacter Campylobacter jejuni Chromosomes Electrophoresis Florfenicol Food chains Food safety Gel electrophoresis Gene polymorphism Gene sequencing Genomic islands Genomics Gram-negative bacteria MDRGI Meat Multidrug resistance Multidrug resistant organisms Multilocus sequence typing Nucleotide sequence Nucleotides optrA Oxazolidinone Oxazolidinones Phylogeny Pigeons Polymorphism Pulsed-field gel electrophoresis Single-nucleotide polymorphism Strains (organisms) Whole genome sequencing Zoonoses |
title | First report of the optrA-carrying multidrug resistance genomic island in Campylobacter jejuni isolated from pigeon meat |
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