Diagnostic accuracy of the Cepheid Xpert Xpress and the Abbott ID NOW assay for rapid detection of SARS‐CoV‐2: A systematic review and meta‐analysis
Rapid and accurate diagnosis of severe acute respiratory syndrome coronavirus 2 (SARS‐CoV‐2) infection is essential to prevent the spread of the virus. We investigated the diagnostic accuracy of the Xpert Xpress and the ID NOW assays for rapid detection of SARS‐CoV‐2 using a systemic review and meta...
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Veröffentlicht in: | Journal of medical virology 2021-07, Vol.93 (7), p.4523-4531 |
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description | Rapid and accurate diagnosis of severe acute respiratory syndrome coronavirus 2 (SARS‐CoV‐2) infection is essential to prevent the spread of the virus. We investigated the diagnostic accuracy of the Xpert Xpress and the ID NOW assays for rapid detection of SARS‐CoV‐2 using a systemic review and meta‐analysis approach. A systematic literature search was performed using PubMed, Embase, and the Cochrane COVID‐19 Study Register. The sensitivity and specificity of these tests for detecting viruses in patients with suspected SARS‐CoV‐2 infection were pooled. We used commercial and laboratory‐developed reverse transcription‐polymerase chain reactions as reference standards. The Quality Assessment of Diagnostic Accuracy Studies‐2 tool was used to assess the risk of bias. We identified 11 studies involving 1734 subjects for the Xpert Xpress assay and 10 studies involving 1778 subjects for the ID NOW assay. The pooled sensitivity and specificity of the Xpert Xpress assay for detection of SARS‐CoV‐2 were 0.99 (95% confidence interval [CI], 0.97 to 0.99) and 0.97 (95% CI, 0.95 to 0.98), respectively. The pooled sensitivity and specificity of the ID NOW assay were 0.79 (95% CI, 0.69 to 0.86) and 1.00 (95% CI, 0.98 to 1.00), respectively. The studies included in our analysis seemed to have low methodological quality. The Xpert Xpress assay showed excellent diagnostic accuracy for rapid detection of SARS‐CoV‐2. However, as the ID NOW assay showed relatively low sensitivity, this test might miss several positive samples.
Highlights
We examined the accuracy of two tests in rapid diagnosis of the SARS‐CoV‐2. The Xpert Xpress assay showed excellent diagnostic accuracy. The ID NOW assay had relatively low pooled sensitivity. |
doi_str_mv | 10.1002/jmv.26994 |
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Highlights
We examined the accuracy of two tests in rapid diagnosis of the SARS‐CoV‐2. The Xpert Xpress assay showed excellent diagnostic accuracy. The ID NOW assay had relatively low pooled sensitivity.</description><identifier>ISSN: 0146-6615</identifier><identifier>EISSN: 1096-9071</identifier><identifier>DOI: 10.1002/jmv.26994</identifier><identifier>PMID: 33913533</identifier><language>eng</language><publisher>HOBOKEN: Wiley</publisher><subject>Accuracy ; Assaying ; Confidence intervals ; Coronaviruses ; COVID-19 ; COVID‐19 testing ; Diagnosis ; Disease control ; Infections ; Life Sciences & Biomedicine ; Meta-analysis ; point‐of‐care testing ; Polymerase chain reaction ; Quality assessment ; Quality control ; Respiratory diseases ; Reverse transcription ; reverse transcription polymerase chain reaction ; SARS‐CoV‐2 ; Science & Technology ; Sensitivity ; Sensitivity analysis ; Severe acute respiratory syndrome ; Severe acute respiratory syndrome coronavirus 2 ; Viral diseases ; Virology ; Viruses</subject><ispartof>Journal of medical virology, 2021-07, Vol.93 (7), p.4523-4531</ispartof><rights>2021 Wiley Periodicals LLC</rights><rights>2021 Wiley Periodicals LLC.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>true</woscitedreferencessubscribed><woscitedreferencescount>27</woscitedreferencescount><woscitedreferencesoriginalsourcerecordid>wos000646455600001</woscitedreferencesoriginalsourcerecordid><citedby>FETCH-LOGICAL-c5374-8236eb9fef542d6ac3d142e32b0fa37a8545693ae788f1d36ab7473aaf30536f3</citedby><cites>FETCH-LOGICAL-c5374-8236eb9fef542d6ac3d142e32b0fa37a8545693ae788f1d36ab7473aaf30536f3</cites><orcidid>0000-0003-2626-7099 ; 0000-0003-4597-7037</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2Fjmv.26994$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2Fjmv.26994$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>230,315,781,785,886,1418,27928,27929,45578,45579</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/33913533$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lee, Jonghoo</creatorcontrib><creatorcontrib>Song, Jae‐Uk</creatorcontrib><title>Diagnostic accuracy of the Cepheid Xpert Xpress and the Abbott ID NOW assay for rapid detection of SARS‐CoV‐2: A systematic review and meta‐analysis</title><title>Journal of medical virology</title><addtitle>J MED VIROL</addtitle><addtitle>J Med Virol</addtitle><description>Rapid and accurate diagnosis of severe acute respiratory syndrome coronavirus 2 (SARS‐CoV‐2) infection is essential to prevent the spread of the virus. We investigated the diagnostic accuracy of the Xpert Xpress and the ID NOW assays for rapid detection of SARS‐CoV‐2 using a systemic review and meta‐analysis approach. A systematic literature search was performed using PubMed, Embase, and the Cochrane COVID‐19 Study Register. The sensitivity and specificity of these tests for detecting viruses in patients with suspected SARS‐CoV‐2 infection were pooled. We used commercial and laboratory‐developed reverse transcription‐polymerase chain reactions as reference standards. The Quality Assessment of Diagnostic Accuracy Studies‐2 tool was used to assess the risk of bias. We identified 11 studies involving 1734 subjects for the Xpert Xpress assay and 10 studies involving 1778 subjects for the ID NOW assay. The pooled sensitivity and specificity of the Xpert Xpress assay for detection of SARS‐CoV‐2 were 0.99 (95% confidence interval [CI], 0.97 to 0.99) and 0.97 (95% CI, 0.95 to 0.98), respectively. The pooled sensitivity and specificity of the ID NOW assay were 0.79 (95% CI, 0.69 to 0.86) and 1.00 (95% CI, 0.98 to 1.00), respectively. The studies included in our analysis seemed to have low methodological quality. The Xpert Xpress assay showed excellent diagnostic accuracy for rapid detection of SARS‐CoV‐2. However, as the ID NOW assay showed relatively low sensitivity, this test might miss several positive samples.
Highlights
We examined the accuracy of two tests in rapid diagnosis of the SARS‐CoV‐2. The Xpert Xpress assay showed excellent diagnostic accuracy. The ID NOW assay had relatively low pooled sensitivity.</description><subject>Accuracy</subject><subject>Assaying</subject><subject>Confidence intervals</subject><subject>Coronaviruses</subject><subject>COVID-19</subject><subject>COVID‐19 testing</subject><subject>Diagnosis</subject><subject>Disease control</subject><subject>Infections</subject><subject>Life Sciences & Biomedicine</subject><subject>Meta-analysis</subject><subject>point‐of‐care testing</subject><subject>Polymerase chain reaction</subject><subject>Quality assessment</subject><subject>Quality control</subject><subject>Respiratory diseases</subject><subject>Reverse transcription</subject><subject>reverse transcription polymerase chain reaction</subject><subject>SARS‐CoV‐2</subject><subject>Science & Technology</subject><subject>Sensitivity</subject><subject>Sensitivity analysis</subject><subject>Severe acute respiratory syndrome</subject><subject>Severe acute respiratory syndrome coronavirus 2</subject><subject>Viral diseases</subject><subject>Virology</subject><subject>Viruses</subject><issn>0146-6615</issn><issn>1096-9071</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>HGBXW</sourceid><recordid>eNqNks9u1DAQxiMEokvhwAsgS1xAaFs7jp2kB6RVyp-iQiUKhVs0cSZdr5J4sb1b5cYjcObxeBKc3WUFSEhcxpbmN9981ucoesjoEaM0Pl5066NY5nlyK5owmstpTlN2O5pQlsiplEwcRPecW1BKszyO70YHnOeMC84n0fdTDde9cV4rAkqtLKiBmIb4OZICl3PUNfm8ROtDtegcgb7eNGdVZbwnZ6fk3cUnAs7BQBpjiYVlGKnRo_La9KPW5ez95Y-v3wpzFWp8QmbEDc5jB-NSi2uNNxvZDj0EAnpoB6fd_ehOA63DB7vzMPr48sWH4vX0_OLVWTE7nyrB02SaxVxilTfYiCSuJShesyRGHle0AZ5CJhIhcw6YZlnDai6hSpOUAzScCi4bfhg93-ouV1WHtcLeW2jLpdUd2KE0oMs_O72el9dmXWYxTWmaBYEnOwFrvqzQ-bLTTmHbQo9m5cpYsDzNsyxJAvr4L3RhVjY8eKQ4E0IwNlJPt5SyxjmLzd4Mo-WYeBkSLzeJB_bR7-735K-IA_BsC9xgZRqnNPYK91j4EzKRiRAy3CgLdPb_dKE9jCEXZtX7MHq8G9UtDv-2XL55e7X1_hOORtnW</recordid><startdate>202107</startdate><enddate>202107</enddate><creator>Lee, Jonghoo</creator><creator>Song, Jae‐Uk</creator><general>Wiley</general><general>Wiley Subscription Services, Inc</general><general>John Wiley and Sons Inc</general><scope>BLEPL</scope><scope>DTL</scope><scope>HGBXW</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7TK</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>K9.</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0003-2626-7099</orcidid><orcidid>https://orcid.org/0000-0003-4597-7037</orcidid></search><sort><creationdate>202107</creationdate><title>Diagnostic accuracy of the Cepheid Xpert Xpress and the Abbott ID NOW assay for rapid detection of SARS‐CoV‐2: A systematic review and meta‐analysis</title><author>Lee, Jonghoo ; Song, Jae‐Uk</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5374-8236eb9fef542d6ac3d142e32b0fa37a8545693ae788f1d36ab7473aaf30536f3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Accuracy</topic><topic>Assaying</topic><topic>Confidence intervals</topic><topic>Coronaviruses</topic><topic>COVID-19</topic><topic>COVID‐19 testing</topic><topic>Diagnosis</topic><topic>Disease control</topic><topic>Infections</topic><topic>Life Sciences & Biomedicine</topic><topic>Meta-analysis</topic><topic>point‐of‐care testing</topic><topic>Polymerase chain reaction</topic><topic>Quality assessment</topic><topic>Quality control</topic><topic>Respiratory diseases</topic><topic>Reverse transcription</topic><topic>reverse transcription polymerase chain reaction</topic><topic>SARS‐CoV‐2</topic><topic>Science & Technology</topic><topic>Sensitivity</topic><topic>Sensitivity analysis</topic><topic>Severe acute respiratory syndrome</topic><topic>Severe acute respiratory syndrome coronavirus 2</topic><topic>Viral diseases</topic><topic>Virology</topic><topic>Viruses</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lee, Jonghoo</creatorcontrib><creatorcontrib>Song, Jae‐Uk</creatorcontrib><collection>Web of Science Core Collection</collection><collection>Science Citation Index Expanded</collection><collection>Web of Science - Science Citation Index Expanded - 2021</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Neurosciences Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Journal of medical virology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lee, Jonghoo</au><au>Song, Jae‐Uk</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Diagnostic accuracy of the Cepheid Xpert Xpress and the Abbott ID NOW assay for rapid detection of SARS‐CoV‐2: A systematic review and meta‐analysis</atitle><jtitle>Journal of medical virology</jtitle><stitle>J MED VIROL</stitle><addtitle>J Med Virol</addtitle><date>2021-07</date><risdate>2021</risdate><volume>93</volume><issue>7</issue><spage>4523</spage><epage>4531</epage><pages>4523-4531</pages><issn>0146-6615</issn><eissn>1096-9071</eissn><abstract>Rapid and accurate diagnosis of severe acute respiratory syndrome coronavirus 2 (SARS‐CoV‐2) infection is essential to prevent the spread of the virus. We investigated the diagnostic accuracy of the Xpert Xpress and the ID NOW assays for rapid detection of SARS‐CoV‐2 using a systemic review and meta‐analysis approach. A systematic literature search was performed using PubMed, Embase, and the Cochrane COVID‐19 Study Register. The sensitivity and specificity of these tests for detecting viruses in patients with suspected SARS‐CoV‐2 infection were pooled. We used commercial and laboratory‐developed reverse transcription‐polymerase chain reactions as reference standards. The Quality Assessment of Diagnostic Accuracy Studies‐2 tool was used to assess the risk of bias. We identified 11 studies involving 1734 subjects for the Xpert Xpress assay and 10 studies involving 1778 subjects for the ID NOW assay. The pooled sensitivity and specificity of the Xpert Xpress assay for detection of SARS‐CoV‐2 were 0.99 (95% confidence interval [CI], 0.97 to 0.99) and 0.97 (95% CI, 0.95 to 0.98), respectively. The pooled sensitivity and specificity of the ID NOW assay were 0.79 (95% CI, 0.69 to 0.86) and 1.00 (95% CI, 0.98 to 1.00), respectively. The studies included in our analysis seemed to have low methodological quality. The Xpert Xpress assay showed excellent diagnostic accuracy for rapid detection of SARS‐CoV‐2. However, as the ID NOW assay showed relatively low sensitivity, this test might miss several positive samples.
Highlights
We examined the accuracy of two tests in rapid diagnosis of the SARS‐CoV‐2. The Xpert Xpress assay showed excellent diagnostic accuracy. The ID NOW assay had relatively low pooled sensitivity.</abstract><cop>HOBOKEN</cop><pub>Wiley</pub><pmid>33913533</pmid><doi>10.1002/jmv.26994</doi><tpages>9</tpages><orcidid>https://orcid.org/0000-0003-2626-7099</orcidid><orcidid>https://orcid.org/0000-0003-4597-7037</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Accuracy Assaying Confidence intervals Coronaviruses COVID-19 COVID‐19 testing Diagnosis Disease control Infections Life Sciences & Biomedicine Meta-analysis point‐of‐care testing Polymerase chain reaction Quality assessment Quality control Respiratory diseases Reverse transcription reverse transcription polymerase chain reaction SARS‐CoV‐2 Science & Technology Sensitivity Sensitivity analysis Severe acute respiratory syndrome Severe acute respiratory syndrome coronavirus 2 Viral diseases Virology Viruses |
title | Diagnostic accuracy of the Cepheid Xpert Xpress and the Abbott ID NOW assay for rapid detection of SARS‐CoV‐2: A systematic review and meta‐analysis |
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