Short-term effect of thinning on the carbon budget of young and middle-aged Scots pine (Pinus sylvestris L.) stands

•Thinned stands still acted as C sinks despite their decreased annual production.•Thinning did not significantly influence the soil CO2 effluxes.•Thinning affected ecosystem’s C sink capacity more in the younger stand. Thinning is the main silvicultural method for improving stand growth and wood quality, however, despite the relevance and extensive use of thinning in forest management, its effect on stand carbon (C) balance is still poorly studied at the ecosystem level. The present case study estimated the two-year post-thinning effect on the C balance of a pole stand and a middle-aged Scots pine stand growing on mesotrophic sandy soils. Moderate thinning from below reduced the stand C storage by 21–24%, however, the amount of C accumulated in woody biomass, which was removed by logging, is expected to recover in both stands in the following four years. The reduced biomass of the trees contributed to the decreased annual net primary production (NPP) of the stand by 9–11%. The absolute value of net ecosystem production decreased by 0.9 and 0.7 t C ha−1 yr−1 in the pole and the middle-aged stand, respectively; still, both thinned plots maintained their C sink status. The production of the herbaceous understorey as well as the production of needles increased in the younger stand after thinning, but this could not compensate for C loss at the stand level. The effect of thinning on the production of mosses and dwarf shrubs was not expressed in either stand, probably due to the too short post-thinning period. Thinning did not significantly affect either total soil respiration or the heterotrophic respiration (Rh). However, it increased the contribution of Rh to total soil respiration, which can be attributed to decreased fine root biomass and root respiration, while the aboveground litterfall was not significantly changed after thinning. Fine root production, which accounted for the main belowground litter input, was significantly lower in both thinned plots. Moderate thinning in the pole and the middle-aged Scots pine stand did not change the ecosystem into a C source and the induced C loss will be compensated during a short post-thinning period.