A feasible method to extract DNA from the cambium of high-canopy trees: from harvest to assessment

Many tropical trees have high canopies and their leaves are not accessible. Thus, the use of tissue from a more accessible organ (cambium) for DNA extraction may be an alternative for molecular studies. We adapted a feasible methodology for extracting genomic DNA from cambium tissue harvested in the...

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Veröffentlicht in:Acta amazonica 2020-12, Vol.50 (4), p.335-338
Hauptverfasser: Mangaravite, Erica, Terra, Vanessa, Okiyama Hattori, Eric Koiti, da Silva Dal'Sasso, Thais Carolina, Bhering, Leonardo Lopes, de Oliveira, Luiz Orlando
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Sprache:eng
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Zusammenfassung:Many tropical trees have high canopies and their leaves are not accessible. Thus, the use of tissue from a more accessible organ (cambium) for DNA extraction may be an alternative for molecular studies. We adapted a feasible methodology for extracting genomic DNA from cambium tissue harvested in the field for the assessment with PCR. We tested three storage conditions (two buffers and a silica gel) and four periods of time after harvest. We used previously described protocols and tested them on three species that occur in Amazonian forests and other biomes: Anadenanthera peregrina var. peregrina, Cedrela fissilis, and Ceiba speciosa. Our protocol obtained suitable PCR-grade genomic DNA for DNA sequencing and microsatellite genotyping. We recommend the use of silica for long-term storage and the buffer with ascorbic acid for short-term storage.
ISSN:0044-5967
1809-4392
DOI:10.1590/1809-4392202001571