Seed Length Controlled by Same Locus in Four Different AA Genome Species of Genus Oryza
To broaden the genetic basis and overcome the yield plateau in Asian cultivated rice, the exploitation and utilization of favorable alleles from rice species with the AA genome has become important and urgent in modern breeding programs. Four different interspecific populations were used to detect q...
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| Veröffentlicht in: | Rice science 2014, Vol.21 (1), p.20-28 |
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| container_title | Rice science |
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| creator | ZHANG, Yu LI, Jing ZHOU, Jia-wu XU, Peng DENG, Xian-neng YANG, Fei DENG, Wei HU, Feng-yi TAO, Da-yun |
| description | To broaden the genetic basis and overcome the yield plateau in Asian cultivated rice, the exploitation and utilization of favorable alleles from rice species with the AA genome has become important and urgent in modern breeding programs. Four different interspecific populations were used to detect quantitative trait locus （QTL） for seed length, including a BC4F2 population derived from Oryza glumaepatula crossed with Dianjingyou 1 （a japonica cultivar）, a BC4F2 population derived from O. nivara crossed with Dianjingyou 1, a BCzF1 population derived from a cross between O. Iongistaminata and RD23 （an indica cultivar）, and a BCsF1 population derived from a cross between O. glaberrima and Dianjingyou 1. The QTLs for seed length in four different populations were termed as SL-3a, SL-3b, SL-3c and SL-3d, respectively. They had good collinearity and accounted for 49% to 60% of the phenotypic variations. Sequencing data indicated that four QTLs were different alleles of GS3 which were responsible for the seed length variation between O. sativa and its four AA genome relatives. These results will be valuable for confirming the evolution of GS3 and also be helpful for rice breeding. |
| doi_str_mv | 10.1016/S1672-6308(13)60165-1 |
| format | Article |
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Four different interspecific populations were used to detect quantitative trait locus （QTL） for seed length, including a BC4F2 population derived from Oryza glumaepatula crossed with Dianjingyou 1 （a japonica cultivar）, a BC4F2 population derived from O. nivara crossed with Dianjingyou 1, a BCzF1 population derived from a cross between O. Iongistaminata and RD23 （an indica cultivar）, and a BCsF1 population derived from a cross between O. glaberrima and Dianjingyou 1. The QTLs for seed length in four different populations were termed as SL-3a, SL-3b, SL-3c and SL-3d, respectively. They had good collinearity and accounted for 49% to 60% of the phenotypic variations. Sequencing data indicated that four QTLs were different alleles of GS3 which were responsible for the seed length variation between O. sativa and its four AA genome relatives. These results will be valuable for confirming the evolution of GS3 and also be helpful for rice breeding.</description><identifier>ISSN: 1672-6308</identifier><identifier>EISSN: 1876-4762</identifier><identifier>DOI: 10.1016/S1672-6308(13)60165-1</identifier><language>eng</language><publisher>Elsevier B.V</publisher><subject>A染色体组 ; O. glaberrima ; O. glumaepatula ; O. longistaminata ; O. nivara ; quantitative trait locus ; seed length ; 受控 ; 数量性状位点 ; 水稻育种 ; 种子 ; 稻属 ; 等位基因 ; 长度变异</subject><ispartof>Rice science, 2014, Vol.21 (1), p.20-28</ispartof><rights>2014 China National Rice Research Institute</rights><rights>Copyright © Wanfang Data Co. Ltd. All Rights Reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c371t-fbeea43a0eb5967bbf3667839f84ebe92f19c5bd180bf8ac602c156a7e62a6903</citedby><cites>FETCH-LOGICAL-c371t-fbeea43a0eb5967bbf3667839f84ebe92f19c5bd180bf8ac602c156a7e62a6903</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Uhttp://image.cqvip.com/vip1000/qk/84241A/84241A.jpg</thumbnail><link.rule.ids>314,776,780,4010,27900,27901,27902</link.rule.ids></links><search><creatorcontrib>ZHANG, Yu</creatorcontrib><creatorcontrib>LI, Jing</creatorcontrib><creatorcontrib>ZHOU, Jia-wu</creatorcontrib><creatorcontrib>XU, Peng</creatorcontrib><creatorcontrib>DENG, Xian-neng</creatorcontrib><creatorcontrib>YANG, Fei</creatorcontrib><creatorcontrib>DENG, Wei</creatorcontrib><creatorcontrib>HU, Feng-yi</creatorcontrib><creatorcontrib>TAO, Da-yun</creatorcontrib><title>Seed Length Controlled by Same Locus in Four Different AA Genome Species of Genus Oryza</title><title>Rice science</title><addtitle>Rice science</addtitle><description>To broaden the genetic basis and overcome the yield plateau in Asian cultivated rice, the exploitation and utilization of favorable alleles from rice species with the AA genome has become important and urgent in modern breeding programs. Four different interspecific populations were used to detect quantitative trait locus （QTL） for seed length, including a BC4F2 population derived from Oryza glumaepatula crossed with Dianjingyou 1 （a japonica cultivar）, a BC4F2 population derived from O. nivara crossed with Dianjingyou 1, a BCzF1 population derived from a cross between O. Iongistaminata and RD23 （an indica cultivar）, and a BCsF1 population derived from a cross between O. glaberrima and Dianjingyou 1. The QTLs for seed length in four different populations were termed as SL-3a, SL-3b, SL-3c and SL-3d, respectively. They had good collinearity and accounted for 49% to 60% of the phenotypic variations. Sequencing data indicated that four QTLs were different alleles of GS3 which were responsible for the seed length variation between O. sativa and its four AA genome relatives. These results will be valuable for confirming the evolution of GS3 and also be helpful for rice breeding.</description><subject>A染色体组</subject><subject>O. glaberrima</subject><subject>O. glumaepatula</subject><subject>O. longistaminata</subject><subject>O. nivara</subject><subject>quantitative trait locus</subject><subject>seed length</subject><subject>受控</subject><subject>数量性状位点</subject><subject>水稻育种</subject><subject>种子</subject><subject>稻属</subject><subject>等位基因</subject><subject>长度变异</subject><issn>1672-6308</issn><issn>1876-4762</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><recordid>eNqFkE9LAzEQxYMoqNWPIMSbIquTzW529ySl_oWChyoeQ5KdtFtqoslWqZ_etNWzpxkev5k38wg5YXDJgImrCRNVngkO9Rnj5yJJZcZ2yAGrK5EVlch3U_-H7JPDGOcAohDQHJDXCWJLx-im_YyOvOuDXyySold0ot6Qjr1ZRto5eueXgd501mJA19PhkN6j84mYvKPpMFJv10qCn8LqWx2RPasWEY9_64C83N0-jx6y8dP942g4zgyvWJ9ZjagKrgB12YhKa8uFqGre2LpAjU1uWWNK3bIatK2VEZAbVgpVociVaIAPyMV275dyVrmpnKc7XXKU39PYrua9lpgDK4ABFIkut7QJPsaAVr6H7k2FlWQg11nKTZZyHZRkXG6yTM2AXG_nML3y2WGQMf3sDLZdQNPL1nf_bjj9dZ55N_3o0qV_1kUDFdR1yX8AYTqGGQ</recordid><startdate>2014</startdate><enddate>2014</enddate><creator>ZHANG, Yu</creator><creator>LI, Jing</creator><creator>ZHOU, Jia-wu</creator><creator>XU, Peng</creator><creator>DENG, Xian-neng</creator><creator>YANG, Fei</creator><creator>DENG, Wei</creator><creator>HU, Feng-yi</creator><creator>TAO, Da-yun</creator><general>Elsevier B.V</general><general>Institute of Food and Crops Research, Yunnan Academy of Agricultural Sciences, Kunming 650205, China</general><scope>2RA</scope><scope>92L</scope><scope>CQIGP</scope><scope>W95</scope><scope>~WA</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>2B.</scope><scope>4A8</scope><scope>92I</scope><scope>93N</scope><scope>PSX</scope><scope>TCJ</scope></search><sort><creationdate>2014</creationdate><title>Seed Length Controlled by Same Locus in Four Different AA Genome Species of Genus Oryza</title><author>ZHANG, Yu ; LI, Jing ; ZHOU, Jia-wu ; XU, Peng ; DENG, Xian-neng ; YANG, Fei ; DENG, Wei ; HU, Feng-yi ; TAO, Da-yun</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c371t-fbeea43a0eb5967bbf3667839f84ebe92f19c5bd180bf8ac602c156a7e62a6903</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>A染色体组</topic><topic>O. glaberrima</topic><topic>O. glumaepatula</topic><topic>O. longistaminata</topic><topic>O. nivara</topic><topic>quantitative trait locus</topic><topic>seed length</topic><topic>受控</topic><topic>数量性状位点</topic><topic>水稻育种</topic><topic>种子</topic><topic>稻属</topic><topic>等位基因</topic><topic>长度变异</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>ZHANG, Yu</creatorcontrib><creatorcontrib>LI, Jing</creatorcontrib><creatorcontrib>ZHOU, Jia-wu</creatorcontrib><creatorcontrib>XU, Peng</creatorcontrib><creatorcontrib>DENG, Xian-neng</creatorcontrib><creatorcontrib>YANG, Fei</creatorcontrib><creatorcontrib>DENG, Wei</creatorcontrib><creatorcontrib>HU, Feng-yi</creatorcontrib><creatorcontrib>TAO, Da-yun</creatorcontrib><collection>中文科技期刊数据库</collection><collection>中文科技期刊数据库-CALIS站点</collection><collection>中文科技期刊数据库-7.0平台</collection><collection>中文科技期刊数据库-农业科学</collection><collection>中文科技期刊数据库- 镜像站点</collection><collection>CrossRef</collection><collection>Wanfang Data Journals - Hong Kong</collection><collection>WANFANG Data Centre</collection><collection>Wanfang Data Journals</collection><collection>万方数据期刊 - 香港版</collection><collection>China Online Journals (COJ)</collection><collection>China Online Journals (COJ)</collection><jtitle>Rice science</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>ZHANG, Yu</au><au>LI, Jing</au><au>ZHOU, Jia-wu</au><au>XU, Peng</au><au>DENG, Xian-neng</au><au>YANG, Fei</au><au>DENG, Wei</au><au>HU, Feng-yi</au><au>TAO, Da-yun</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Seed Length Controlled by Same Locus in Four Different AA Genome Species of Genus Oryza</atitle><jtitle>Rice science</jtitle><addtitle>Rice science</addtitle><date>2014</date><risdate>2014</risdate><volume>21</volume><issue>1</issue><spage>20</spage><epage>28</epage><pages>20-28</pages><issn>1672-6308</issn><eissn>1876-4762</eissn><abstract>To broaden the genetic basis and overcome the yield plateau in Asian cultivated rice, the exploitation and utilization of favorable alleles from rice species with the AA genome has become important and urgent in modern breeding programs. Four different interspecific populations were used to detect quantitative trait locus （QTL） for seed length, including a BC4F2 population derived from Oryza glumaepatula crossed with Dianjingyou 1 （a japonica cultivar）, a BC4F2 population derived from O. nivara crossed with Dianjingyou 1, a BCzF1 population derived from a cross between O. Iongistaminata and RD23 （an indica cultivar）, and a BCsF1 population derived from a cross between O. glaberrima and Dianjingyou 1. The QTLs for seed length in four different populations were termed as SL-3a, SL-3b, SL-3c and SL-3d, respectively. They had good collinearity and accounted for 49% to 60% of the phenotypic variations. Sequencing data indicated that four QTLs were different alleles of GS3 which were responsible for the seed length variation between O. sativa and its four AA genome relatives. 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| identifier | ISSN: 1672-6308 |
| ispartof | Rice science, 2014, Vol.21 (1), p.20-28 |
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| source | Alma/SFX Local Collection |
| subjects | A染色体组 O. glaberrima O. glumaepatula O. longistaminata O. nivara quantitative trait locus seed length 受控 数量性状位点 水稻育种 种子 稻属 等位基因 长度变异 |
| title | Seed Length Controlled by Same Locus in Four Different AA Genome Species of Genus Oryza |
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