Single Nucleotide Polymorphism of CYP3A4 Intron 2 and Its Influence on CYP3A4 mRNA Expression and Liver Enzymatic Activity in Human Liver
Summary: In adult liver, CYP3A4 plays an important role in the metabolism of a wide range of en- dogenous and exogenous compounds. To investigate whether there is a single nucleotide polymorphism (SNP) of CYP3A4 intron 2 in the liver and its effects on the mRNA expression and enzymatic activity of C...
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description | Summary: In adult liver, CYP3A4 plays an important role in the metabolism of a wide range of en- dogenous and exogenous compounds. To investigate whether there is a single nucleotide polymorphism (SNP) of CYP3A4 intron 2 in the liver and its effects on the mRNA expression and enzymatic activity of CYP3A4, genomic DNA was extracted from 96 liver tissue samples obtained from patients who had undergone liver surgery. An SNP of CYP3A4 intron 2 was identified by polymerase chain reaction (PCR)-single-strand confirmation polymorphism and DNA sequencing. The mRNA expression of CYP3A4 was determined by the fluorescence quantitative PCR technique. The enzymatic activity of CYP3A4 was measured using erythromycin and testosterone as probe substrates. Twelve patients were found to have the SNP/T4127G CYP3A4 within intron 2. The mRNA levels of CYP3A4 in wild-type and SNP/T4127G samples were 2.62±1.09 and 2.79±1.63, respectively (P〉0.05). Erythromycin N-demethylase activity in wild-type and SNP/T4127G samples were 121.2±32.8 and 124.7±61.6 nmol·mg^-1min^-1, respectively (P〉0.05). The activity of testosterone 613-hydroxylase was significantly different between wild-type (648±173 pmol·mg^-1·min^-1) and SNP/T4127G samples (540-4-196 pmol.mg-l-minl; P〈0.05). In conclusion, the SNP/T4127G of CYP3A4 intron 2 exists in the liver. This SNP does not affect the mRNA expression of CYP3A4 but significantly decreases the hepatic micro- somal testosterone 613-hydroxylase activity of CYP3A4. Furthermore, this study indicates that the ap- propriate selection of probe substrates is very important in studying the relationship between the geno- type and phenotype of CYP3A4. |
doi_str_mv | 10.1007/s11596-015-1460-z |
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To investigate whether there is a single nucleotide polymorphism (SNP) of CYP3A4 intron 2 in the liver and its effects on the mRNA expression and enzymatic activity of CYP3A4, genomic DNA was extracted from 96 liver tissue samples obtained from patients who had undergone liver surgery. An SNP of CYP3A4 intron 2 was identified by polymerase chain reaction (PCR)-single-strand confirmation polymorphism and DNA sequencing. The mRNA expression of CYP3A4 was determined by the fluorescence quantitative PCR technique. The enzymatic activity of CYP3A4 was measured using erythromycin and testosterone as probe substrates. Twelve patients were found to have the SNP/T4127G CYP3A4 within intron 2. The mRNA levels of CYP3A4 in wild-type and SNP/T4127G samples were 2.62±1.09 and 2.79±1.63, respectively (P〉0.05). Erythromycin N-demethylase activity in wild-type and SNP/T4127G samples were 121.2±32.8 and 124.7±61.6 nmol·mg^-1min^-1, respectively (P〉0.05). The activity of testosterone 613-hydroxylase was significantly different between wild-type (648±173 pmol·mg^-1·min^-1) and SNP/T4127G samples (540-4-196 pmol.mg-l-minl; P〈0.05). In conclusion, the SNP/T4127G of CYP3A4 intron 2 exists in the liver. This SNP does not affect the mRNA expression of CYP3A4 but significantly decreases the hepatic micro- somal testosterone 613-hydroxylase activity of CYP3A4. Furthermore, this study indicates that the ap- propriate selection of probe substrates is very important in studying the relationship between the geno- type and phenotype of CYP3A4.</description><identifier>ISSN: 1672-0733</identifier><identifier>EISSN: 1993-1352</identifier><identifier>DOI: 10.1007/s11596-015-1460-z</identifier><identifier>PMID: 26223917</identifier><language>eng</language><publisher>Wuhan: Huazhong University of Science and Technology</publisher><subject>Adult ; Asian Continental Ancestry Group - genetics ; China ; Cytochrome P-450 CYP3A - genetics ; Cytochrome P-450 CYP3A - metabolism ; Erythromycin - metabolism ; Genotype ; Humans ; Introns ; Liver - enzymology ; Medicine ; Medicine & Public Health ; mRNA表达 ; Phenotype ; Polymorphism, Single Nucleotide ; RNA, Messenger - genetics ; Sequence Analysis, DNA - methods ; Testosterone - metabolism ; 内含子 ; 单核苷酸多态性 ; 单链构象多态性 ; 基因组DNA ; 聚合酶链反应 ; 肝脏 ; 酶活性</subject><ispartof>Journal of Huazhong University of Science and Technology. Medical sciences, 2015-08, Vol.35 (4), p.502-507</ispartof><rights>Huazhong University of Science and Technology and Springer-Verlag Berlin Heidelberg 2015</rights><rights>Copyright © Wanfang Data Co. Ltd. All Rights Reserved.</rights><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c407t-529e4fd068afe3b61635ff4170c244fa0d45e225d13aeec921c9f788b62147b13</citedby><cites>FETCH-LOGICAL-c407t-529e4fd068afe3b61635ff4170c244fa0d45e225d13aeec921c9f788b62147b13</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Uhttp://image.cqvip.com/vip1000/qk/85740A/85740A.jpg</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26223917$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Huang, Min</creatorcontrib><creatorcontrib>Wang, Han-ming</creatorcontrib><creatorcontrib>Guo, Yu</creatorcontrib><creatorcontrib>Ping, Jie</creatorcontrib><creatorcontrib>Chen, Man</creatorcontrib><creatorcontrib>Xu, Dan</creatorcontrib><creatorcontrib>Wang, Hui</creatorcontrib><title>Single Nucleotide Polymorphism of CYP3A4 Intron 2 and Its Influence on CYP3A4 mRNA Expression and Liver Enzymatic Activity in Human Liver</title><title>Journal of Huazhong University of Science and Technology. Medical sciences</title><addtitle>J. Huazhong Univ. Sci. Technol. [Med. Sci.]</addtitle><addtitle>Journal of Zuazhong University of Science and Technology: Medical Edition</addtitle><description>Summary: In adult liver, CYP3A4 plays an important role in the metabolism of a wide range of en- dogenous and exogenous compounds. To investigate whether there is a single nucleotide polymorphism (SNP) of CYP3A4 intron 2 in the liver and its effects on the mRNA expression and enzymatic activity of CYP3A4, genomic DNA was extracted from 96 liver tissue samples obtained from patients who had undergone liver surgery. An SNP of CYP3A4 intron 2 was identified by polymerase chain reaction (PCR)-single-strand confirmation polymorphism and DNA sequencing. The mRNA expression of CYP3A4 was determined by the fluorescence quantitative PCR technique. The enzymatic activity of CYP3A4 was measured using erythromycin and testosterone as probe substrates. Twelve patients were found to have the SNP/T4127G CYP3A4 within intron 2. The mRNA levels of CYP3A4 in wild-type and SNP/T4127G samples were 2.62±1.09 and 2.79±1.63, respectively (P〉0.05). Erythromycin N-demethylase activity in wild-type and SNP/T4127G samples were 121.2±32.8 and 124.7±61.6 nmol·mg^-1min^-1, respectively (P〉0.05). The activity of testosterone 613-hydroxylase was significantly different between wild-type (648±173 pmol·mg^-1·min^-1) and SNP/T4127G samples (540-4-196 pmol.mg-l-minl; P〈0.05). In conclusion, the SNP/T4127G of CYP3A4 intron 2 exists in the liver. This SNP does not affect the mRNA expression of CYP3A4 but significantly decreases the hepatic micro- somal testosterone 613-hydroxylase activity of CYP3A4. Furthermore, this study indicates that the ap- propriate selection of probe substrates is very important in studying the relationship between the geno- type and phenotype of CYP3A4.</description><subject>Adult</subject><subject>Asian Continental Ancestry Group - genetics</subject><subject>China</subject><subject>Cytochrome P-450 CYP3A - genetics</subject><subject>Cytochrome P-450 CYP3A - metabolism</subject><subject>Erythromycin - metabolism</subject><subject>Genotype</subject><subject>Humans</subject><subject>Introns</subject><subject>Liver - enzymology</subject><subject>Medicine</subject><subject>Medicine & Public Health</subject><subject>mRNA表达</subject><subject>Phenotype</subject><subject>Polymorphism, Single Nucleotide</subject><subject>RNA, Messenger - genetics</subject><subject>Sequence Analysis, DNA - methods</subject><subject>Testosterone - metabolism</subject><subject>内含子</subject><subject>单核苷酸多态性</subject><subject>单链构象多态性</subject><subject>基因组DNA</subject><subject>聚合酶链反应</subject><subject>肝脏</subject><subject>酶活性</subject><issn>1672-0733</issn><issn>1993-1352</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kUuP0zAUhSMEYh7wA9ggi9VIKOBX7GZZVYWpVA0jHgtWlpNcd1wSu2MnQ9N_MP8aVynDjpWt6--ce-STZW8I_kAwlh8jIUUpckyKnHCB88Oz7JyUJcsJK-jzdBeS5lgydpZdxLjFuJCC8pfZGRWUspLI8-zxm3WbFtDNULfge9sAuvXt2Pmwu7OxQ96gxc9bNudo5frgHaJIuwat-pgGph3A1YDS-AR1X2_maLnfBYjRpvGRXdsHCGjpDmOne1ujed3bB9uPyDp0PXTaTcSr7IXRbYTXp_My-_Fp-X1xna-_fF4t5uu85lj2eUFL4KbBYqYNsEoQwQpjOJG4ppwbjRteAKVFQ5gGqEtK6tLI2awSlHBZEXaZvZ98f2tntNuorR-CSxtVvx1_Nft9pYCmL8UcY5Hoq4neBX8_QOxVZ2MNbasd-CGqtDdFEXR2RMmE1sHHGMCoXbCdDqMiWB37UlNfKpmrY1_qkDRvT_ZD1UHzpPhbUALoBMT05DYQ_sX9n-u7U5I77zb3SfdkLEQhCJNUsD8ENqsk</recordid><startdate>20150801</startdate><enddate>20150801</enddate><creator>Huang, Min</creator><creator>Wang, Han-ming</creator><creator>Guo, Yu</creator><creator>Ping, Jie</creator><creator>Chen, Man</creator><creator>Xu, Dan</creator><creator>Wang, Hui</creator><general>Huazhong University of Science and Technology</general><general>Department of Endocrinology, Hubei Integrative Chinese and Western Medicine Hospital, Wuhan 430015, China</general><general>Department of Pharmacology, Basic Medical School of Wuhan University, Wuhan 430071, China%Department of Endocrinology, Hubei Integrative Chinese and Western Medicine Hospital, Wuhan 430015, China%Department of Pharmacology, Basic Medical School of Wuhan University, Wuhan 430071, China%Department of Pharmacology, Basic Medical School of Wuhan University, Wuhan 430071, China</general><general>Hubei Provincial Key Laboratory of Developmentally Originated Disease, Wuhan 430071, China</general><scope>2RA</scope><scope>92L</scope><scope>CQIGP</scope><scope>W91</scope><scope>~WA</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>2B.</scope><scope>4A8</scope><scope>92I</scope><scope>93N</scope><scope>PSX</scope><scope>TCJ</scope></search><sort><creationdate>20150801</creationdate><title>Single Nucleotide Polymorphism of CYP3A4 Intron 2 and Its Influence on CYP3A4 mRNA Expression and Liver Enzymatic Activity in Human Liver</title><author>Huang, Min ; 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Medical sciences</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Huang, Min</au><au>Wang, Han-ming</au><au>Guo, Yu</au><au>Ping, Jie</au><au>Chen, Man</au><au>Xu, Dan</au><au>Wang, Hui</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Single Nucleotide Polymorphism of CYP3A4 Intron 2 and Its Influence on CYP3A4 mRNA Expression and Liver Enzymatic Activity in Human Liver</atitle><jtitle>Journal of Huazhong University of Science and Technology. Medical sciences</jtitle><stitle>J. Huazhong Univ. Sci. Technol. [Med. Sci.]</stitle><addtitle>Journal of Zuazhong University of Science and Technology: Medical Edition</addtitle><date>2015-08-01</date><risdate>2015</risdate><volume>35</volume><issue>4</issue><spage>502</spage><epage>507</epage><pages>502-507</pages><issn>1672-0733</issn><eissn>1993-1352</eissn><abstract>Summary: In adult liver, CYP3A4 plays an important role in the metabolism of a wide range of en- dogenous and exogenous compounds. To investigate whether there is a single nucleotide polymorphism (SNP) of CYP3A4 intron 2 in the liver and its effects on the mRNA expression and enzymatic activity of CYP3A4, genomic DNA was extracted from 96 liver tissue samples obtained from patients who had undergone liver surgery. An SNP of CYP3A4 intron 2 was identified by polymerase chain reaction (PCR)-single-strand confirmation polymorphism and DNA sequencing. The mRNA expression of CYP3A4 was determined by the fluorescence quantitative PCR technique. The enzymatic activity of CYP3A4 was measured using erythromycin and testosterone as probe substrates. Twelve patients were found to have the SNP/T4127G CYP3A4 within intron 2. The mRNA levels of CYP3A4 in wild-type and SNP/T4127G samples were 2.62±1.09 and 2.79±1.63, respectively (P〉0.05). Erythromycin N-demethylase activity in wild-type and SNP/T4127G samples were 121.2±32.8 and 124.7±61.6 nmol·mg^-1min^-1, respectively (P〉0.05). The activity of testosterone 613-hydroxylase was significantly different between wild-type (648±173 pmol·mg^-1·min^-1) and SNP/T4127G samples (540-4-196 pmol.mg-l-minl; P〈0.05). In conclusion, the SNP/T4127G of CYP3A4 intron 2 exists in the liver. This SNP does not affect the mRNA expression of CYP3A4 but significantly decreases the hepatic micro- somal testosterone 613-hydroxylase activity of CYP3A4. Furthermore, this study indicates that the ap- propriate selection of probe substrates is very important in studying the relationship between the geno- type and phenotype of CYP3A4.</abstract><cop>Wuhan</cop><pub>Huazhong University of Science and Technology</pub><pmid>26223917</pmid><doi>10.1007/s11596-015-1460-z</doi><tpages>6</tpages></addata></record> |
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subjects | Adult Asian Continental Ancestry Group - genetics China Cytochrome P-450 CYP3A - genetics Cytochrome P-450 CYP3A - metabolism Erythromycin - metabolism Genotype Humans Introns Liver - enzymology Medicine Medicine & Public Health mRNA表达 Phenotype Polymorphism, Single Nucleotide RNA, Messenger - genetics Sequence Analysis, DNA - methods Testosterone - metabolism 内含子 单核苷酸多态性 单链构象多态性 基因组DNA 聚合酶链反应 肝脏 酶活性 |
title | Single Nucleotide Polymorphism of CYP3A4 Intron 2 and Its Influence on CYP3A4 mRNA Expression and Liver Enzymatic Activity in Human Liver |
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